Factsheet for TraesCS5A01G108000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G122700.1	Wheat	plastid	100.0	100.0
TraesCS5B01G115300.1	Wheat	golgi	99.74	99.74
HORVU5Hr1G032980.1	Barley	plastid	99.22	99.22
TraesCS4A01G206400.1	Wheat	plastid	94.03	93.3
Os11t0171300-01	Rice	extracellular, plastid	93.25	92.53
EES09371	Sorghum	plastid	91.95	91.24
Zm00001d053015_P001	Maize	plastid	90.39	88.32
GSMUA_Achr6P17900_001	Banana	plastid	88.83	87.92
GSMUA_Achr8P17280_001	Banana	plastid	85.45	84.79
VIT_03s0038g00670.t01	Wine grape	plastid	87.27	84.42
VIT_04s0023g03010.t01	Wine grape	plastid	86.49	84.09
Solyc02g084440.2.1	Tomato	plastid	84.94	83.42
PGSC0003DMT400008103	Potato	cytosol, extracellular, plastid	85.71	83.12
Solyc01g110360.2.1	Tomato	plastid	85.71	83.12
GSMUA_Achr5P19920_001	Banana	plasma membrane, plastid	83.9	82.61
CDY12112	Canola	plastid	82.08	82.51
CDX90302	Canola	plastid	82.08	82.51
KRH60768	Soybean	plastid	84.42	82.28
PGSC0003DMT400009127	Potato	plastid	84.16	82.03
AT4G38970.1	Thale cress	plastid	84.68	81.91
CDX82019	Canola	plastid	84.16	81.41
CDY22401	Canola	plastid	82.86	81.17
Bra031181.1-P	Field mustard	plastid	84.16	81.0
KRH29349	Soybean	plastid	83.9	80.95
KRH29352	Soybean	plastid	83.9	80.95
Bra010717.1-P	Field mustard	plastid	82.6	80.92
CDX72725	Canola	plastid	82.6	80.92
KRH24377	Soybean	plastid	83.64	80.9
Bra030303.1-P	Field mustard	plastid	81.82	80.77
CDY15898	Canola	plastid	81.82	80.77
CDX99600	Canola	plastid	81.82	80.77
Bra033589.1-P	Field mustard	plastid	82.08	80.41
AT2G21330.1	Thale cress	plastid	83.12	80.2
CDY42595	Canola	plastid	82.86	79.95
Bra011884.1-P	Field mustard	plastid	83.9	78.97
CDY72367	Canola	plastid	63.38	76.97
TraesCS3A01G020300.1	Wheat	plastid	74.29	67.61
Bra033590.1-P	Field mustard	plastid	20.0	65.81
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	51.17	55.03
TraesCS3A01G391100.1	Wheat	golgi	50.39	54.19
TraesCS7A01G381100.2	Wheat	endoplasmic reticulum, mitochondrion	50.39	49.74
TraesCS5A01G009400.1	Wheat	cytosol	29.35	44.49

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	InterPro:IPR013785
PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF36	SUPFAM:SSF51569	EnsemblPlantsGene:TraesCS5A01G108000
EnsemblPlants:TraesCS5A01G108000.1	TIGR:cd00948	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:191092025..191093295

Molecular Weight (calculated)

41637.8 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.165

Length

385 amino acids

Sequence
(BLAST)

001: MASATLLKSS FLPKKAEWGV ARQVAAPRVS MVVRAGAYDD ELVKTAKTIA SPGRGILAMD ESNATCGKRL DSIGLENTEA NRQAFRTLLV SVPGLGNHIS
101: GAILFEETLY QSTVDGKKIV DILVEQGIVP GIKVDKGLVP LTGSNDESWC QGLDGLASRE AAYYQQGARF AKWRTVVSIP NGPSELAVKE AAWGLARYAA
201: ISQDNGLVPI VEPEILLDGE HGIERTFEVA QKVWAETFYQ MAQNNVMFEG ILLKPSMVTP GAECKDRATP EQVADYTLKL LSRRVPPAVP GIMFLSGGQS
301: EVEATLNLNA MNQGPNPWHV SFSYARALQN TCLKTWGGRP ENVKAAQEAL LLRAKANSLA QLGKYTSDGE AAEAKEGMFV KNYSY

Best Arabidopsis Sequence Match ( AT4G38970.1 )
(BLAST)

001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY

Arabidopsis Description

FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.