Factsheet for PGSC0003DMT400072632

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g083570.1.1	Tomato	extracellular	99.16	99.16
PGSC0003DMT400006894	Potato	cytosol	93.02	93.02
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	86.31	86.31
EES06798	Sorghum	cytosol	84.92	84.92
TraesCS3B01G422900.1	Wheat	cytosol	81.28	84.84
TraesCS3B01G423200.1	Wheat	cytosol	84.64	84.64
TraesCS3A01G391100.1	Wheat	golgi	84.64	84.64
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	84.36	84.36
KRH16972	Soybean	nucleus	84.36	84.36
Zm00001d042453_P001	Maize	plasma membrane	83.52	84.23
CDX67550	Canola	cytosol	84.08	84.08
CDY13330	Canola	cytosol	84.08	84.08
TraesCS3D01G383700.1	Wheat	golgi	84.08	84.08
TraesCS3D01G384000.1	Wheat	cytosol, golgi	84.08	84.08
Zm00001d012103_P001	Maize	extracellular, plasma membrane	83.24	83.94
EES04064	Sorghum	cytosol	83.24	83.94
CDX78134	Canola	cytosol	83.8	83.8
KRH67855	Soybean	endoplasmic reticulum	83.8	83.8
CDY66283	Canola	cytosol	83.8	83.8
CDX76248	Canola	cytosol	83.8	83.8
CDX73593	Canola	cytosol, extracellular	83.8	83.8
AT2G36460.1	Thale cress	cytosol	83.8	83.8
Bra009517.1-P	Field mustard	cytosol	83.52	83.29
AT3G52930.1	Thale cress	cytosol	83.24	83.24
Os01t0905800-01	Rice	cytosol, extracellular	83.24	83.24
Bra028543.1-P	Field mustard	cytosol	83.24	83.24
KRH72603	Soybean	nucleus	82.96	82.96
KRH20036	Soybean	cytosol, mitochondrion, nucleus	82.68	82.68
GSMUA_Achr11P...	Banana	cytosol	44.69	82.47
Bra019639.1-P	Field mustard	cytosol	82.12	82.12
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	82.12	82.12
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	81.56	81.56
TraesCS3D01G384100.2	Wheat	cytosol	83.24	81.42
HORVU3Hr1G088570.1	Barley	mitochondrion, plasma membrane	84.92	80.21
PGSC0003DMT400057332	Potato	cytosol	77.09	80.0
Os05t0402700-01	Rice	extracellular	74.3	79.88
Os08t0120600-01	Rice	cytosol, plasma membrane, plastid	79.61	78.73
Bra006960.1-P	Field mustard	cytosol	82.96	78.57
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	84.92	78.55
HORVU3Hr1G088500.2	Barley	cytosol	48.6	77.68
Bra017234.1-P	Field mustard	cytosol	74.3	77.55
CDY43716	Canola	cytosol	74.3	77.55
GSMUA_Achr11P...	Banana	cytosol	28.21	77.1
AT5G03690.1	Thale cress	mitochondrion	83.8	76.34
TraesCS5A01G009400.1	Wheat	cytosol	50.0	70.47
PGSC0003DMT400031351	Potato	cytosol, extracellular, plastid	55.87	50.63
PGSC0003DMT400078520	Potato	extracellular, plastid	55.31	50.13
PGSC0003DMT400009127	Potato	plastid	55.03	49.87
PGSC0003DMT400008103	Potato	cytosol, extracellular, plastid	55.03	49.62
Bra017233.1-P	Field mustard	nucleus, plastid	84.08	22.75

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	ProteinID:ABB16974	ProteinID:ABB16974.1	ProteinID:ABB29926	ProteinID:ABB29926.1
InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	EMBL:DQ228325	EMBL:DQ235169	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	UniProt:M1CQP6	PFAM:PF00274	EnsemblPlantsGene:PGSC0003DMG400028261	PGSC:PGSC0003DMG400028261	EnsemblPlants:PGSC0003DMT400072632
ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF35	SUPFAM:SSF51569	UniParc:UPI0002957E19	:

Description

Fructose-bisphosphate aldolase [Source:PGSC_GENE;Acc:PGSC0003DMG400028261]

Coordinates

chr10:+:55609500..55613616

Molecular Weight (calculated)

38442.1 Da

IEP (calculated)

8.436

GRAVY (calculated)

-0.219

Length

358 amino acids

Sequence
(BLAST)

001: MSCYKGKYAD ELIKNAAYIA TPGKGILAAD ESTGTIGKRL SSINVENVES NRRALRELLF CAPGALQYLS GIILFEETLY QKTAAGKPFV DVMKEGGVLP
101: GIKVDKGTVE LPGTNGETTT QGLDGLAERC QKYYAAGARF AKWRAVLKIG ANEPSQLAIN DNANGLARYA IICQQNGLVP IVEPEILVDG SHDIKKCADV
201: TERVLAACYK ALNDHHVLLE GTLLKPNMVT PGSDAPKVAP EVIAEYTVRA LQRTMPAAVP AVVFLSGGQS EEEATRNLNA MNKLQTKKPW TLSFSFGRAL
301: QQSTLKAWSG KEENIGKAQA ALLTRCKANS EATLGKYAGS SNLGDGASES LHVKDYKY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.