Factsheet for HORVU3Hr1G088570.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52930.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G423200.1	Wheat	cytosol	93.4	98.88
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	93.14	98.6
TraesCS3D01G384100.2	Wheat	cytosol	92.08	95.36
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	95.78	93.8
EES06798	Sorghum	cytosol	84.96	89.94
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	84.96	89.94
EES04064	Sorghum	cytosol	84.17	89.86
Zm00001d042453_P001	Maize	plasma membrane	83.91	89.58
Os01t0905800-01	Rice	cytosol, extracellular	84.43	89.39
Zm00001d012103_P001	Maize	extracellular, plasma membrane	83.64	89.3
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	83.64	88.55
HORVU3Hr1G088500.2	Barley	cytosol	52.24	88.39
GSMUA_Achr5P25490_001	Banana	cytosol	75.99	87.54
GSMUA_Achr8P08990_001	Banana	cytosol	76.78	87.39
Os05t0402700-01	Rice	extracellular	76.25	86.79
Solyc10g083570.1.1	Tomato	extracellular	80.47	85.2
PGSC0003DMT400072632	Potato	cytosol	80.21	84.92
KRH67855	Soybean	endoplasmic reticulum	79.95	84.64
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	79.16	83.8
GSMUA_Achr8P01230_001	Banana	cytosol	69.92	83.6
KRH20036	Soybean	cytosol, mitochondrion, nucleus	78.89	83.52
AT2G36460.1	Thale cress	cytosol	78.89	83.52
PGSC0003DMT400006894	Potato	cytosol	78.63	83.24
AT3G52930.1	Thale cress	cytosol	78.36	82.96
Bra028543.1-P	Field mustard	cytosol	78.36	82.96
KRH16972	Soybean	nucleus	78.1	82.68
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.84	82.4
GSMUA_Achr8P07620_001	Banana	mitochondrion, plastid	79.16	82.19
Bra009517.1-P	Field mustard	cytosol	77.57	81.89
KRH72603	Soybean	nucleus	77.31	81.84
Bra019639.1-P	Field mustard	cytosol	77.04	81.56
Bra006960.1-P	Field mustard	cytosol	78.1	78.31
Bra017234.1-P	Field mustard	cytosol	68.87	76.09
AT5G03690.1	Thale cress	mitochondrion	77.31	74.55
HORVU5Hr1G032980.1	Barley	plastid	52.24	51.43
HORVU4Hr1G019570.1	Barley	plastid	51.72	50.52
HORVU3Hr1G002780.2	Barley	plastid	48.02	42.33
Bra017233.1-P	Field mustard	nucleus, plastid	79.95	22.9

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	UniProt:A0A287M5E0	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I
GO:GO:0003674	GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016829	EnsemblPlantsGene:HORVU3Hr1G088570	EnsemblPlants:HORVU3Hr1G088570.1	InterPro:IPR013785	PFAM:PF00274	ScanProsite:PS00158
PANTHER:PTHR11627	PANTHER:PTHR11627:SF38	SUPFAM:SSF51569	UniParc:UPI000B475346	:	:

Description

Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A287M5E0]

Coordinates

chrchr3H:+:625272707..625274948

Molecular Weight (calculated)

41226.4 Da

IEP (calculated)

8.240

GRAVY (calculated)

-0.288

Length

379 amino acids

Sequence
(BLAST)

001: QTRLPTPNLP LQLSNLPRAS TMSAYCGKYK DELIKNAAYI GTPGKGILAA DESTGTIGKR FASINVENVE DNRRALRELL FCTPGALQYL SGVILFEETL
101: YQSTKGGKPF VDILKEGNVL PGIKVDKGTV ELAGTNGETT TQGFDDLGKR CAKYYEAGAR FAKWRAVLKI GPTEPSQLSI NQNAQGLARY AIICQENGLV
201: PIVEPEILVD GPHDIDRCAY VTEMVLAACY KALNDQHVLL EGTLLKPNMV TPGSDAKKVT PEVIAEYTVR TLQRTVPAAV PAIVFLSGGQ SEEEATLNLN
301: AMNKLQTKKP WNLSFSFGRA LQQSTLKAWS GKAENEEKAR KAFLVRCKAN SEATLGTYKG DATLGEGASE SLHVKDYKY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.