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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
mitochondrion: 27780359
endoplasmic reticulum: 28499913
mitochondrion: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16972 Soybean nucleus 96.09 96.09
CDY13330 Canola cytosol 86.59 86.59
CDX67550 Canola cytosol 86.59 86.59
CDY66283 Canola cytosol 86.31 86.31
CDX73593 Canola cytosol, extracellular 86.31 86.31
CDX76248 Canola cytosol 86.31 86.31
CDX78134 Canola cytosol 86.31 86.31
Bra028543.1-P Field mustard cytosol 86.03 86.03
AT2G36460.1 Thale cress cytosol 85.75 85.75
AT3G52930.1 Thale cress cytosol 85.47 85.47
KRH67855 Soybean endoplasmic reticulum 85.47 85.47
VIT_08s0007g03830.t01 Wine grape cytosol, extracellular 85.2 85.2
KRH20036 Soybean cytosol, mitochondrion, nucleus 84.64 84.64
KRH32664 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 84.36 84.36
Bra019639.1-P Field mustard cytosol 84.36 84.36
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 83.8 83.8
PGSC0003DMT400006894 Potato cytosol 83.24 83.24
PGSC0003DMT400072632 Potato cytosol 82.96 82.96
Solyc10g083570.1.1 Tomato extracellular 82.96 82.96
TraesCS3B01G422900.1 Wheat cytosol 78.77 82.22
Os01t0905800-01 Rice cytosol, extracellular 82.12 82.12
TraesCS3A01G391500.1 Wheat cytosol, golgi, unclear 81.84 81.84
EES06798 Sorghum cytosol 81.84 81.84
TraesCS3B01G423200.1 Wheat cytosol 81.56 81.56
TraesCS3D01G384000.1 Wheat cytosol, golgi 81.56 81.56
TraesCS3D01G383700.1 Wheat golgi 81.28 81.28
Bra006960.1-P Field mustard cytosol 85.75 81.22
TraesCS3A01G391100.1 Wheat golgi 81.01 81.01
EES04064 Sorghum cytosol 79.89 80.56
GSMUA_Achr11P... Banana cytosol 43.58 80.41
Zm00001d042453_P001 Maize plasma membrane 79.61 80.28
Zm00001d012103_P001 Maize extracellular, plasma membrane 79.33 80.0
Bra017234.1-P Field mustard cytosol 76.26 79.59
CDY43716 Canola cytosol 75.98 79.3
Os10t0163340-01 Rice cytosol, extracellular, plasma membrane, plastid 79.05 79.05
KRH73948 Soybean cytosol, endoplasmic reticulum 78.77 78.99
KRH14187 Soybean cytosol, nucleus 78.77 78.99
TraesCS3D01G384100.2 Wheat cytosol 80.45 78.69
Os08t0120600-01 Rice cytosol, plasma membrane, plastid 78.49 77.62
HORVU3Hr1G088570.1 Barley mitochondrion, plasma membrane 81.84 77.31
Os05t0402700-01 Rice extracellular 71.79 77.18
HORVU3Hr1G088500.2 Barley cytosol 48.04 76.79
GSMUA_Achr11P... Banana cytosol 27.65 75.57
HORVU3Hr1G088540.1 Barley cytosol, mitochondrion, plastid 81.28 75.19
TraesCS5A01G009400.1 Wheat cytosol 46.37 65.35
KRH24377 Soybean plastid 57.54 51.76
KRH29349 Soybean plastid 57.54 51.63
KRH29352 Soybean plastid 57.54 51.63
KRH60768 Soybean plastid 55.87 50.63
KRH35847 Soybean endoplasmic reticulum 54.47 50.0
KRG90928 Soybean nucleus, plastid 54.19 50.0
KRH26114 Soybean plastid 51.4 48.68
Bra017233.1-P Field mustard nucleus, plastid 84.08 22.75
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13EntrezGene:100783089
MapMan:2.1.1.2MapMan:3.1.2.2Gene3D:3.20.20.70EMBL:ACUP02001223InterPro:Aldolase_I_ASInterPro:Aldolase_TIM
InterPro:FBA_IEnsemblPlantsGene:GLYMA_02G222400GO:GO:0003674GO:GO:0003824GO:GO:0004332GO:GO:0005975
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016829UniProt:I1JH86InterPro:IPR013785EnsemblPlants:KRH72603
ProteinID:KRH72603ProteinID:KRH72603.1PFAM:PF00274ScanProsite:PS00158PANTHER:PTHR11627PANTHER:PTHR11627:SF24
MetaCyc:PWY-1042MetaCyc:PWY-1861MetaCyc:PWY-5484MetaCyc:PWY-6142MetaCyc:PWY-7385SUPFAM:SSF51569
UniParc:UPI0001CA989B:::::
Description
hypothetical protein
Coordinates
chr2:-:40998557..41001678
Molecular Weight (calculated)
38266.6 Da
IEP (calculated)
7.631
GRAVY (calculated)
-0.162
Length
358 amino acids
Sequence
(BLAST)
001: MSHFKGKYHD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASISVENIES NRRALRELLF TAPGVLQYLS GVILFEETLY QSTAAGKPFV NVLKEAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGQRC AKYYEAGARF AKWRAVLKIG PNEPSELSIH ENAYGLARYA VICQENGLVP IVEPEILVDG PHDIHKCAAV
201: TERVLAACYK ALNDHHVLLE GTLLKPNMVT PGSQSAKVSP QVVAEHTVRA LQRTVPAAVP AVVFLSGGQS EEEASVNLNA INQVNGKKPW SLSFSFGRAL
301: QQSTLKAWGG KEENVKKAQE ALLVRAKANS EATLGTYKGN SQLADGASES LHVSNYSY
Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)
001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY
Arabidopsis Description
FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.