CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52930.1	CDY32970	AT5G42980.1	15352244
AT3G52930.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66283	Canola	cytosol	100.0	100.0
CDX73593	Canola	cytosol, extracellular	99.44	99.44
CDX78134	Canola	cytosol	99.44	99.44
CDX67550	Canola	cytosol	99.16	99.16
CDY13330	Canola	cytosol	99.16	99.16
Bra019639.1-P	Field mustard	cytosol	97.49	97.49
AT3G52930.1	Thale cress	cytosol	97.49	97.49
KRH16972	Soybean	nucleus	87.71	87.71
KRH72603	Soybean	nucleus	86.31	86.31
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	85.47	85.47
CDY43716	Canola	cytosol	81.56	85.13
Solyc10g083570.1.1	Tomato	extracellular	83.8	83.8
PGSC0003DMT400072632	Potato	cytosol	83.8	83.8
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	82.68	82.68
PGSC0003DMT400006894	Potato	cytosol	82.12	82.12
GSMUA_Achr11P...	Banana	cytosol	43.3	79.9
GSMUA_Achr11P...	Banana	cytosol	29.05	79.39
CDY69912	Canola	cytosol	9.78	77.78
CDY12112	Canola	plastid	54.47	50.91
CDX90302	Canola	plastid	54.47	50.91
CDX82019	Canola	plastid	56.15	50.5
CDY37348	Canola	plastid	54.75	50.39
CDY40400	Canola	plastid	54.75	50.39
CDY22401	Canola	plastid	54.47	49.62
CDX72725	Canola	plastid	54.47	49.62
CDY15898	Canola	plastid	53.91	49.49
CDX99600	Canola	plastid	53.91	49.49
CDY42595	Canola	plastid	55.03	49.37
CDY72367	Canola	plastid	40.22	45.43

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	GO:A0A078JFE6	UniProt:A0A078JFE6	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM
EnsemblPlants:CDX76248	ProteinID:CDX76248	ProteinID:CDX76248.1	ProteinID:CDY66283.1	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
EnsemblPlantsGene:GSBRNA2T00126584001	InterPro:IPR013785	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF24
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7385	SUPFAM:SSF51569
UniPathway:UPA00109	UniParc:UPI0004EC3222	:	:	:	:

Description

BnaA04g05120DFructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078JFE6]

Coordinates

chrLK031806:+:2127526..2129392

Molecular Weight (calculated)

38492.9 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.218

Length

358 amino acids

Sequence
(BLAST)

001: MSAFTSKYAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVET NRRALRELLF TAPGALPCLS GVILFEETLY QKSSDGKLFV DILKEGGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGERC KKYYEAGARF AKWRAVLKIG ENEPSEHSIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIHKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSDSAKVAP EVIAEHTVRA LQRTVPPAVP AIVFLSGGQS EEEATKNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWAG KEENVKAAQE ALYVRCKANS EATLGTYKGD AKLGDGAAES LHVKDYKY

Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)

001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY

Arabidopsis Description

FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.