CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76248	Canola	cytosol	77.78	9.78
CDY66283	Canola	cytosol	77.78	9.78
CDX67550	Canola	cytosol	75.56	9.5
CDX73593	Canola	cytosol, extracellular	75.56	9.5
CDX78134	Canola	cytosol	75.56	9.5
CDY13330	Canola	cytosol	75.56	9.5
CDY43716	Canola	cytosol	71.11	9.33
Os08t0120600-01	Rice	cytosol, plasma membrane, plastid	66.67	8.29
CDY72367	Canola	plastid	42.22	5.99
CDY12112	Canola	plastid	42.22	4.96
CDX90302	Canola	plastid	42.22	4.96
CDX99600	Canola	plastid	42.22	4.87
CDY15898	Canola	plastid	42.22	4.87
CDY22401	Canola	plastid	42.22	4.83
CDX72725	Canola	plastid	42.22	4.83
CDY42595	Canola	plastid	42.22	4.76
CDX82019	Canola	plastid	40.0	4.52
CDY37348	Canola	plastid	37.78	4.37
CDY40400	Canola	plastid	37.78	4.37

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	Gene3D:3.20.20.70
MapMan:35.2	GO:A0A078JWH7	UniProt:A0A078JWH7	InterPro:Aldolase_TIM	EnsemblPlants:CDY69912	ProteinID:CDY69912
ProteinID:CDY69912.1	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824	GO:GO:0004332	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00093410001	InterPro:IPR013785	PFAM:PF00274	PANTHER:PTHR11627
PANTHER:PTHR11627:SF24	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7385
SUPFAM:SSF51569	UniPathway:UPA00109	UniParc:UPI0004EE4A3D	:	:	:

Description

BnaAnng31970DBnaAnng31970D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWH7]

Coordinates

chrLK040671:-:3..817

Molecular Weight (calculated)

4660.6 Da

IEP (calculated)

4.545

GRAVY (calculated)

0.353

Length

45 amino acids

Sequence
(BLAST)

1: MSSFCLKITM ASFTSKYADE LIANAAYIGT PGKGILAADE STGTI

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.