CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14187	Soybean	cytosol, nucleus	98.32	98.32
Solyc07g065900.2.1	Tomato	nucleus	90.48	90.48
PGSC0003DMT400057332	Potato	cytosol	87.39	90.43
VIT_19s0015g01720.t01	Wine grape	cytosol	89.92	89.92
AT4G26530.3	Thale cress	cytosol	85.71	85.47
GSMUA_Achr3P12000_001	Banana	cytosol, plasma membrane	80.39	85.42
Os06t0608700-03	Rice	cytosol	81.79	81.56
TraesCS7B01G283000.1	Wheat	cytosol	80.95	80.28
TraesCS7D01G377400.1	Wheat	cytosol, golgi	80.67	80.0
EER88632	Sorghum	cytosol	79.27	79.05
KRH72603	Soybean	nucleus	78.99	78.77
KRH67855	Soybean	endoplasmic reticulum	78.99	78.77
AT4G26520.3	Thale cress	cytosol	78.43	78.21
KRH16972	Soybean	nucleus	77.87	77.65
KRH20036	Soybean	cytosol, mitochondrion, nucleus	75.35	75.14
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	75.07	74.86
TraesCS7A01G381100.2	Wheat	endoplasmic reticulum, mitochondrion	80.39	73.59
KRH29352	Soybean	plastid	59.1	52.88
KRH29349	Soybean	plastid	59.1	52.88
KRH24377	Soybean	plastid	58.82	52.76
KRH60768	Soybean	plastid	58.26	52.66
KRG90928	Soybean	nucleus, plastid	56.86	52.32
KRH35847	Soybean	endoplasmic reticulum	57.14	52.31
KRH26114	Soybean	plastid	54.62	51.59
Zm00001d046553_P003	Maize	cytosol	75.07	40.42

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	EMBL:ACUP02001291	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	ncoils:Coil
InterPro:FBA_I	EnsemblPlantsGene:GLYMA_02G303000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004332	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	UniProt:I1JJM3	InterPro:IPR013785	EnsemblPlants:KRH73948
ProteinID:KRH73948	ProteinID:KRH73948.1	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF35
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7385	SUPFAM:SSF51569
UniParc:UPI00023BD081	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:47847723..47850282

Molecular Weight (calculated)

38378.9 Da

IEP (calculated)

7.285

GRAVY (calculated)

-0.151

Length

357 amino acids

Sequence
(BLAST)

001: MSAFVGKYAD ELIKNAKYIA TPGKGILAAD ESTGTIGKRL ASINVENIEA NRQALRELLF TAPNALQYLS GVILFEETLY QKTSDGKPFV EVLQENNVIP
101: GIKVDKGVVE LAGTNGETTT QGFDSLGARC QQYYKAGARF AKWRAVLKIG PTEPSQLSIQ QNAQGLARYA IICQENGLVP IVEPEILTDG AHDIAKCAAV
201: TETVLAAVYK ALNEQHVLLE GTLLKPNMVT PGSDSPKVPP EVIAEYTVQA LRRTVPAAVP GVVFLSGGQS EEEATLNLNA MNKSELLKPW TLSFSFGRAL
301: QQSTLKTWGG KKENVAKAQE AFLARCKANS DATLGKYVGG SGSGLTSESL YVKNYNY

Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)

001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY

Arabidopsis Description

FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.