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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH73948 Soybean cytosol, endoplasmic reticulum 98.32 98.32
Solyc07g065900.2.1 Tomato nucleus 91.6 91.6
PGSC0003DMT400057332 Potato cytosol 88.52 91.59
VIT_19s0015g01720.t01 Wine grape cytosol 91.04 91.04
GSMUA_Achr3P12000_001 Banana cytosol, plasma membrane 82.07 87.2
AT4G26530.3 Thale cress cytosol 86.55 86.31
Os06t0608700-03 Rice cytosol 82.35 82.12
TraesCS7B01G283000.1 Wheat cytosol 81.79 81.11
TraesCS7D01G377400.1 Wheat cytosol, golgi 81.51 80.83
EER88632 Sorghum cytosol 80.67 80.45
KRH67855 Soybean endoplasmic reticulum 78.99 78.77
KRH72603 Soybean nucleus 78.99 78.77
AT4G26520.3 Thale cress cytosol 78.71 78.49
KRH16972 Soybean nucleus 78.15 77.93
KRH20036 Soybean cytosol, mitochondrion, nucleus 75.63 75.42
KRH32664 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 75.35 75.14
TraesCS7A01G381100.2 Wheat endoplasmic reticulum, mitochondrion 81.23 74.36
KRH29349 Soybean plastid 58.54 52.38
KRH29352 Soybean plastid 58.54 52.38
KRH24377 Soybean plastid 58.26 52.26
KRH60768 Soybean plastid 57.7 52.15
KRG90928 Soybean nucleus, plastid 56.3 51.8
KRH35847 Soybean endoplasmic reticulum 56.58 51.79
KRH26114 Soybean plastid 54.06 51.06
Zm00001d046553_P003 Maize cytosol 76.47 41.18
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13EntrezGene:100792394
MapMan:2.1.1.2MapMan:3.1.2.2Gene3D:3.20.20.70EMBL:ACUP02008494InterPro:Aldolase_I_ASInterPro:Aldolase_TIM
InterPro:FBA_IEnsemblPlantsGene:GLYMA_14G010900GO:GO:0003674GO:GO:0003824GO:GO:0004332GO:GO:0005975
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016829UniProt:I1M6D5InterPro:IPR013785EnsemblPlants:KRH14187
ProteinID:KRH14187ProteinID:KRH14187.1PFAM:PF00274ScanProsite:PS00158PANTHER:PTHR11627PANTHER:PTHR11627:SF35
MetaCyc:PWY-1042MetaCyc:PWY-1861MetaCyc:PWY-5484MetaCyc:PWY-6142MetaCyc:PWY-7385SUPFAM:SSF51569
UniParc:UPI000233BB2ASEG:seg::::
Description
hypothetical protein
Coordinates
chr14:-:827469..830016
Molecular Weight (calculated)
38423.0 Da
IEP (calculated)
6.554
GRAVY (calculated)
-0.145
Length
357 amino acids
Sequence
(BLAST)
001: MSAFVGKYAD ELIKNAKYIA TPGKGILAAD ESTGTIGKRL SSINVENIEA NRQALRELLF TAPDALQYLS GVILFEETLY QKTSDGKPFV EVLQENNVIP
101: GIKVDKGVVE LAGTNGETTT QGFDSLGARC QQYYKAGARF AKWRAVLKIG PTEPSELSIQ QNAQGLARYA IICQENGLVP IVEPEILTDG AHDIAKCAAV
201: TETVLAAVYK ALNEQHVLLE GTLLKPNMVT PGSDSPKVPP EVIAEYTVQA LRRTVPAAVP GVVFLSGGQS EEEATLNLNA MNKLEVLKPW TLSFSFGRAL
301: QQSTLKTWGG KKENVAKAQE AFLARCKANS DATLGKYVGG SGSGLTSESL YVKNYKY
Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)
001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY
Arabidopsis Description
FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.