CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0327400-01	Rice	plastid	88.95	88.0
Zm00001d049975_P001	Maize	plastid	88.41	85.86
TraesCS7A01G370200.1	Wheat	plastid	85.18	84.04
TraesCS7D01G352900.1	Wheat	golgi, plastid	85.18	84.04
HORVU7Hr1G085220.11	Barley	plastid	83.83	83.6
TraesCS7B01G258300.1	Wheat	plastid	84.64	83.51
PGSC0003DMT400029759	Potato	extracellular	69.27	80.56
KXG35263	Sorghum	plastid	81.13	80.48
GSMUA_Achr1P19640_001	Banana	plastid	81.13	78.8
GSMUA_Achr4P19270_001	Banana	plastid	79.25	76.76
CDY18037	Canola	plastid	70.62	71.2
VIT_06s0004g01310.t01	Wine grape	plastid	75.2	71.17
CDY33402	Canola	plastid	70.62	71.0
CDX93100	Canola	plastid	74.39	70.05
Solyc01g006450.2.1	Tomato	plastid	73.85	69.9
AT2G05990.1	Thale cress	plastid	73.32	69.74
Solyc10g078740.1.1	Tomato	plastid	73.58	69.64
PGSC0003DMT400081904	Potato	plastid	73.58	69.64
CDY50414	Canola	plastid	70.89	68.85
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	72.51	68.62
KRH46610	Soybean	plastid	71.43	67.43
Bra013160.1-P	Field mustard	plastid	69.0	66.49
Bra013159.1-P	Field mustard	plastid	68.73	66.41
GSMUA_Achr3P11700_001	Banana	plastid	50.67	63.3
KRG99594	Soybean	cytosol	71.7	62.0
KRH24187	Soybean	nucleus	73.05	58.79
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	74.93	55.94

Protein Annotations

EnsemblPlants:KXG25034	EnsemblPlantsGene:SORBI_3007G112100	Gene3D:1.10.8.400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	PFAM:PF13561	PRINTS:PR00081	ProteinID:KXG25033.1	ProteinID:KXG25034
ProteinID:KXG25034.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0001C80C72	UniProt:A0A1B6PH65	MapMan:5.1.4.5

Description

hypothetical protein

Coordinates

chr7:+:42744075..42748053

Molecular Weight (calculated)

39004.6 Da

IEP (calculated)

8.405

GRAVY (calculated)

0.071

Length

371 amino acids

Sequence
(BLAST)

001: MAASAAAGVQ MVAARPCISA SQGIHAARVA VSRTDCMLST TATFPKISCS WPLDSKRNGV LVRAISGESG RQGLPIDLRG KRAFIAGVAD DNGYGWAIAK
101: ALAAAGAEIL VGTWVPALNI FETSLRRGKF DESRKLPDGS LMDIVKVYPL DAVYDSPDDV PEDVKSNKRY AGSSNWTVKE VVESVKNDFG SIDILVHSLA
201: NGPEVTKPLL ETSRRGYLAA ISASSYSYVS LLQHFLPIMN PGGASISLTY IASERAIPGY GGGMSSAKAA LESDTRVLAF EAGRKGKIRV NTISAGPLGS
301: RAAKAIGFIE KMIEYSYVNS PLQKELLADE VGNTAAFLVS SLASAITGST VYVDNGLNTM GIAIDSPTIT S

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.