Factsheet for PGSC0003DMT400081904

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006450.2.1	Tomato	plastid	98.72	98.72
PGSC0003DMT400029759	Potato	extracellular	70.92	87.15
VIT_06s0004g01310.t01	Wine grape	plastid	80.61	80.61
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	80.36	80.36
KRH46610	Soybean	plastid	75.51	75.32
CDY18037	Canola	plastid	70.66	75.27
CDY33402	Canola	plastid	70.41	74.8
AT2G05990.1	Thale cress	plastid	73.98	74.36
TraesCS5A01G172700.1	Wheat	plastid	70.66	74.06
HORVU7Hr1G085220.11	Barley	plastid	70.15	73.92
Zm00001d019926_P004	Maize	plastid	70.41	73.8
Os08t0327400-01	Rice	plastid	70.41	73.6
KXG25034	Sorghum	plastid	69.64	73.58
KXG35263	Sorghum	plastid	70.15	73.53
TraesCS5B01G170100.1	Wheat	golgi, plastid	69.9	73.26
TraesCS5D01G177200.1	Wheat	plastid	69.9	73.26
TraesCS7A01G370200.1	Wheat	plastid	70.15	73.14
TraesCS7D01G352900.1	Wheat	golgi, plastid	70.15	73.14
TraesCS7B01G258300.1	Wheat	plastid	69.9	72.87
CDX93100	Canola	plastid	72.96	72.59
GSMUA_Achr1P19640_001	Banana	plastid	70.66	72.51
Os09t0277800-01	Rice	plastid	68.62	72.51
CDY50414	Canola	plastid	70.41	72.25
GSMUA_Achr4P19270_001	Banana	plastid	70.41	72.06
KRG99594	Soybean	cytosol	76.28	69.7
Bra013160.1-P	Field mustard	plastid	68.37	69.61
Bra013159.1-P	Field mustard	plastid	67.86	69.27
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	50.26	69.12
KRH24187	Soybean	nucleus	78.83	67.03
Zm00001d049975_P001	Maize	plastid	64.8	66.49
HORVU5Hr1G053010.2	Barley	plastid	70.15	61.52
GSMUA_Achr3P11700_001	Banana	plastid	44.64	58.92
Zm00001d030275_P001	Maize	plastid	12.24	34.53
Zm00001d030276_P001	Maize	plastid	12.24	34.53
Zm00001d030277_P001	Maize	cytosol, plastid	10.2	33.61
Zm00001d030274_P001	Maize	cytosol	3.06	17.65

Protein Annotations

EnsemblPlants:PGSC0003DMT400081904	EnsemblPlantsGene:PGSC0003DMG400032152	EntrezGene:102593496	Gene3D:1.10.8.400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43159	PANTHER:PTHR43159:SF1	PFAM:PF13561	PGSC:PGSC0003DMG400032152	PRINTS:PR00081
RefSeq:XP_006354203.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002955A21	UniProt:M1D593	MapMan:5.1.4.5

Description

Enoyl-acyl-carrier-protein reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400032152]

Coordinates

chr1:+:2043182..2048782

Molecular Weight (calculated)

41849.9 Da

IEP (calculated)

8.980

GRAVY (calculated)

-0.006

Length

392 amino acids

Sequence
(BLAST)

001: MAASAASSFQ ITIARPSVLS TRRISSFCST KFGGETQKLS CNRLASSCHV SSIQHFWRSF TSTTQKLQKV VTKAKSEADD SKPASVLPID LRGKRAFIAG
101: IADDNGYGWA IAKSLAAAGA EILVGTWVPA LNIFETSLRR GKFDESRVLP DGSLMEITKV YPLDAVFDSL EDVPEDIKTN KRYAGSSKWT VSEVAESVKE
201: DFGSIDILVH SLANGPEVTK PLLETSRRGY LAAISASSYS YVSLLKHFLP IMNPGGSSIS LTYIASERII PGYGGGMSSA KAALESDTRV LAFEAGRKQK
301: VRVNTISAGP LRSRAAKAIG FIDMMIDYSI ANAPLQRELS ADEVGNTAAF LASPLASAIT GAVIYVDNGL NAMGVGVDSP IFKDLNIPKS TE

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.