Factsheet for TraesCS7D01G352900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G370200.1	Wheat	plastid	98.67	98.67
HORVU7Hr1G085220.11	Barley	plastid	97.61	98.66
TraesCS7B01G258300.1	Wheat	plastid	97.87	97.87
Os08t0327400-01	Rice	plastid	88.3	88.53
KXG25034	Sorghum	plastid	84.04	85.18
TraesCS5D01G177200.1	Wheat	plastid	82.45	82.89
PGSC0003DMT400029759	Potato	extracellular	69.95	82.45
GSMUA_Achr1P19640_001	Banana	plastid	80.05	78.8
GSMUA_Achr4P19270_001	Banana	plastid	77.66	76.24
Zm00001d049975_P001	Maize	plastid	76.33	75.13
CDY18037	Canola	plastid	70.48	72.01
VIT_06s0004g01310.t01	Wine grape	plastid	75.0	71.94
CDY33402	Canola	plastid	70.48	71.82
Solyc10g078740.1.1	Tomato	plastid	74.73	71.68
CDX93100	Canola	plastid	74.47	71.07
AT2G05990.1	Thale cress	plastid	73.67	71.03
CDY50414	Canola	plastid	71.28	70.16
PGSC0003DMT400081904	Potato	plastid	73.14	70.15
Solyc01g006450.2.1	Tomato	plastid	72.61	69.64
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	71.54	68.62
Bra013160.1-P	Field mustard	plastid	68.88	67.27
Bra013159.1-P	Field mustard	plastid	68.62	67.19
KRH46610	Soybean	plastid	70.21	67.18
GSMUA_Achr3P11700_001	Banana	plastid	51.06	64.65
KRG99594	Soybean	cytosol	70.48	61.77
KRH24187	Soybean	nucleus	72.07	58.79
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	73.94	55.94

Protein Annotations

EnsemblPlants:TraesCS7D01G352900.1	EnsemblPlantsGene:TraesCS7D01G352900	Gene3D:1.10.8.400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	PFAM:PF13561	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
TIGR:cd05372	MapMan:5.1.4.5	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:454671904..454675704

Molecular Weight (calculated)

39098.8 Da

IEP (calculated)

8.549

GRAVY (calculated)

0.125

Length

376 amino acids

Sequence
(BLAST)

001: MAPCATAGAQ MLAARPCVSA SQSMLASRAA VSRIDLALGA SSFASCPRIS CSRSLGSSRS SPVAVRAVSG EGSSSGLPID LRGKRAFIAG VADDNGYGWA
101: IAKALAAAGA EILVGTWVPA LNIFETSLRR GKFDESRKLP DGSLMEIVKV YPLDAVYDSP EDVPEDVKTN KRYAGSSNWT VKEAAELVKK EYGSIDILVH
201: SLANGPEVTK PLLETSRSGY LAAISASSYS FVSLLKHFLP IMNPGGASIS LTYIASERTI PGYGGGMSSA KAALESDTKV LAFEAGRKGK IRVNTISAGP
301: LGSRAAKAIG FIEKMIEYSY VNAPLQKELL ADEVGNTAAF LVSPLASAIT GSTVYVDNGL NTMGLAVDSP TVSSLL

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.