Factsheet for Bra013159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013160.1-P	Field mustard	plastid	94.79	94.55
CDX93100	Canola	plastid	92.97	90.61
CDY50414	Canola	plastid	87.24	87.7
AT2G05990.1	Thale cress	plastid	82.81	81.54
VIT_06s0004g01310.t01	Wine grape	plastid	71.88	70.41
Os09t0277800-01	Rice	plastid	67.19	69.54
Os08t0327400-01	Rice	plastid	67.71	69.33
HORVU7Hr1G085220.11	Barley	plastid	66.93	69.09
KXG25034	Sorghum	plastid	66.41	68.73
TraesCS5A01G172700.1	Wheat	plastid	66.93	68.72
Zm00001d019926_P004	Maize	plastid	66.93	68.72
TraesCS7D01G352900.1	Wheat	golgi, plastid	67.19	68.62
TraesCS7A01G370200.1	Wheat	plastid	67.19	68.62
TraesCS5D01G177200.1	Wheat	plastid	66.67	68.45
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	50.78	68.42
TraesCS7B01G258300.1	Wheat	plastid	66.93	68.35
TraesCS5B01G170100.1	Wheat	golgi, plastid	66.41	68.18
Solyc01g006450.2.1	Tomato	plastid	69.53	68.11
KXG35263	Sorghum	plastid	66.15	67.91
PGSC0003DMT400081904	Potato	plastid	69.27	67.86
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	68.75	67.35
KRH46610	Soybean	plastid	67.71	66.16
GSMUA_Achr1P19640_001	Banana	plastid	65.36	65.71
GSMUA_Achr4P19270_001	Banana	plastid	64.84	65.01
Zm00001d049975_P001	Maize	plastid	60.42	60.73
KRG99594	Soybean	cytosol	67.71	60.61
HORVU5Hr1G053010.2	Barley	plastid	66.41	57.05
KRH24187	Soybean	nucleus	67.19	55.97
GSMUA_Achr3P11700_001	Banana	plastid	40.1	51.85
Zm00001d030277_P001	Maize	cytosol, plastid	10.16	32.77
Zm00001d030275_P001	Maize	plastid	11.46	31.65
Zm00001d030276_P001	Maize	plastid	11.46	31.65
Zm00001d030274_P001	Maize	cytosol	2.34	13.24

Protein Annotations

EnsemblPlants:Bra013159.1	EnsemblPlants:Bra013159.1-P	EnsemblPlantsGene:Bra013159	Gene3D:1.10.8.400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	PFAM:PF13561	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002540987	UniProt:M4D9J9	MapMan:5.1.4.5	:	:

Description

AT2G05990 (E=4e-159) MOD1, ENR1 | MOD1 (MOSAIC DEATH 1); enoyl-[acyl-carrier-protein] reductase (NADH)/ enoyl-[acyl-carrier-protein] reductase/ oxidoreductase

Coordinates

chrA03:-:20132187..20134031

Molecular Weight (calculated)

40544.0 Da

IEP (calculated)

7.930

GRAVY (calculated)

-0.069

Length

384 amino acids

Sequence
(BLAST)

001: MAATSAASSL QMATTRASIS AAASKARTCS VGANPRNASW DKIACPRHLS NLRCLRNDSA LPASKKSFSF STKAMSESSE SKASSGLPID LRGKRAFIAG
101: IADDNGYGWA IAKSLAAAGA EILVGTWVPA LNIFETSLRR GKFDQSRVLP DGSLMEIKKV YPLDAVFDTP DDVPEDVKAN KRYAGSSNWT VQEAAECVRQ
201: DFGSIDILVH SLANGPEART LSETVLQELY SVLPDGRSSD IFSHFLPIMN PGGASISLTY IASERIIPGY GGGMSSAKAA LESDTRVLAF EAGRKQNIRV
301: NTISAGPLGS RAAKAIGFID TMIEYSYNNA PIQKSLTADE VGNAAAFLVS PLASAITGAT IYVDNGLNSM GVALDSPVFK DLNK

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.