Factsheet for Zm00001d019926_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35263	Sorghum	plastid	96.26	96.26
Os09t0277800-01	Rice	plastid	86.9	87.6
TraesCS5D01G177200.1	Wheat	plastid	86.1	86.1
TraesCS5B01G170100.1	Wheat	golgi, plastid	86.1	86.1
TraesCS5A01G172700.1	Wheat	plastid	85.56	85.56
PGSC0003DMT400029759	Potato	extracellular	68.18	79.94
GSMUA_Achr4P19270_001	Banana	plastid	79.95	78.07
GSMUA_Achr1P19640_001	Banana	plastid	79.41	77.75
Zm00001d049975_P001	Maize	plastid	75.4	73.82
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	55.88	73.33
HORVU5Hr1G053010.2	Barley	plastid	86.36	72.26
VIT_06s0004g01310.t01	Wine grape	plastid	75.13	71.68
CDY18037	Canola	plastid	69.52	70.65
Solyc10g078740.1.1	Tomato	plastid	73.8	70.41
PGSC0003DMT400081904	Potato	plastid	73.8	70.41
AT2G05990.1	Thale cress	plastid	73.26	70.26
CDY33402	Canola	plastid	69.25	70.19
Solyc01g006450.2.1	Tomato	plastid	73.53	70.15
CDX93100	Canola	plastid	73.8	70.05
CDY50414	Canola	plastid	70.86	69.37
KRH46610	Soybean	plastid	71.93	68.45
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	71.66	68.37
Bra013159.1-P	Field mustard	plastid	68.72	66.93
Bra013160.1-P	Field mustard	plastid	68.45	66.49
GSMUA_Achr3P11700_001	Banana	plastid	52.41	65.99
KRG99594	Soybean	cytosol	71.93	62.7
KRH24187	Soybean	nucleus	71.39	57.92
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	72.73	54.73
Zm00001d030275_P001	Maize	plastid	13.64	36.69
Zm00001d030276_P001	Maize	plastid	13.64	36.69
Zm00001d030277_P001	Maize	cytosol, plastid	11.23	35.29
Zm00001d030274_P001	Maize	cytosol	2.67	14.71

Protein Annotations

Gene3D:1.10.8.400	EntrezGene:100192829	Gene3D:3.40.50.720	MapMan:5.1.4.5	UniProt:B6TYG2	EMBL:BT034921
EMBL:EU970027	GO:GO:0003674	GO:GO:0003824	GO:GO:0004318	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM53942.1	ProteinID:ONM53947.1	PFAM:PF13561	PRINTS:PR00081	PANTHER:PTHR43159
PANTHER:PTHR43159:SF1	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI000182F1CE	EnsemblPlantsGene:Zm00001d019926	EnsemblPlants:Zm00001d019926_P004
EnsemblPlants:Zm00001d019926_T004	SEG:seg	:	:	:	:

Description

Enoyl-[acyl-carrier-protein] reductase [NADH] chloroplastic

Coordinates

chr7:-:76711087..76715496

Molecular Weight (calculated)

39368.2 Da

IEP (calculated)

9.272

GRAVY (calculated)

0.073

Length

374 amino acids

Sequence
(BLAST)

001: MGAYATTGMQ MIATRPSIPA YRQILGSTSA LSAFGRSICS RTGFAISSKA TSAGPLVSSN CKRVVVRAMS QRGAQGLPID LTGKRAFIAG VADDNGYGWA
101: IAKALAAAGA EILVGTWVPA LNIFETSLRR GKFDESRKLP DGSLMEIAKV YPLDAVYDTP EDVPEDVKAN KRYAGASNWT VKEVVETVKN DFGSIDILVH
201: SLANGPEVTK SLLETSRRGY LAAISASSYS YVSLLQHFLP IMNPGGASIS LTYIASERII PGYGGGMSSA KAALESDTRV LAYEAGRKGK IRVNTISAGP
301: LGSRAAKAIG FIEKMIEYSY VNAPLQKELL ADEVGNTAAF LVSPLASAIT GSTIYVDNGL NTMGLALDSP TLST

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.