Factsheet for GSMUA_Achr3P11700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19640_001	Banana	plastid	71.04	55.24
GSMUA_Achr4P19270_001	Banana	plastid	70.71	54.83
Zm00001d019926_P004	Maize	plastid	65.99	52.41
Os08t0327400-01	Rice	plastid	65.66	52.0
Os09t0277800-01	Rice	plastid	64.31	51.48
PGSC0003DMT400029759	Potato	extracellular	55.22	51.41
HORVU7Hr1G085220.11	Barley	plastid	64.31	51.34
KXG35263	Sorghum	plastid	64.65	51.34
TraesCS5D01G177200.1	Wheat	plastid	64.31	51.07
TraesCS5B01G170100.1	Wheat	golgi, plastid	64.31	51.07
TraesCS7D01G352900.1	Wheat	golgi, plastid	64.65	51.06
TraesCS7A01G370200.1	Wheat	plastid	64.65	51.06
TraesCS5A01G172700.1	Wheat	plastid	63.97	50.8
TraesCS7B01G258300.1	Wheat	plastid	64.31	50.8
KXG25034	Sorghum	plastid	63.3	50.67
Zm00001d049975_P001	Maize	plastid	59.6	46.34
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	59.93	45.41
VIT_06s0004g01310.t01	Wine grape	plastid	59.6	45.15
PGSC0003DMT400081904	Potato	plastid	58.92	44.64
Solyc01g006450.2.1	Tomato	plastid	58.59	44.39
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	42.42	44.21
Solyc10g078740.1.1	Tomato	plastid	58.25	44.13
CDY18037	Canola	plastid	54.55	44.02
CDX93100	Canola	plastid	58.25	43.91
CDY33402	Canola	plastid	54.55	43.9
AT2G05990.1	Thale cress	plastid	57.24	43.59
KRH46610	Soybean	plastid	57.24	43.26
HORVU5Hr1G053010.2	Barley	plastid	64.31	42.73
CDY50414	Canola	plastid	54.55	42.41
Bra013160.1-P	Field mustard	plastid	52.19	40.26
Bra013159.1-P	Field mustard	plastid	51.85	40.1
KRG99594	Soybean	cytosol	56.57	39.16
KRH24187	Soybean	nucleus	59.6	38.39
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	59.93	35.81
Zm00001d030275_P001	Maize	plastid	5.72	12.23
Zm00001d030276_P001	Maize	plastid	5.72	12.23
Zm00001d030274_P001	Maize	cytosol	2.69	11.76
Zm00001d030277_P001	Maize	cytosol, plastid	3.7	9.24

Protein Annotations

EnsemblPlants:GSMUA_Achr3P11700_001	EnsemblPlants:GSMUA_Achr3T11700_001	EnsemblPlantsGene:GSMUA_Achr3G11700_001	Gene3D:1.10.8.400	Gene3D:3.40.50.720	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43159	PANTHER:PTHR43159:SF1	PFAM:PF13561
SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002959A10	UniProt:M0SDT7	MapMan:5.1.4.5

Description

Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G11700_001]

Coordinates

chr3:+:8701170..8705242

Molecular Weight (calculated)

32122.7 Da

IEP (calculated)

10.065

GRAVY (calculated)

0.044

Length

297 amino acids

Sequence
(BLAST)

001: MSRATASKFN PKVASQGLTK LSNISLQGLP ERYPSSSSKY HRIVPRAMAS SAYLFVFSGK RAFIAGVADD NGYGWAIAKA LAAAGAEILV GTWVPDLNIF
101: ETSLRRGKFD NSLIMSMNAK YRFSKYRPSI HTYIQCENNN FCKQVTKLLL ETSRRGYLAA ISASSYSFIS LLQYFLLIMN PGGASVSLTY IACERTITGD
201: NRVLVSEAGR KGQIRVNTIS AGPLRSRAAK AVGFIEKMID YSYSNAPLQK ELLADEVGNT ASLFVSPLAS AVTGSVVYVD NGLNTMGLAI DSPTLSA

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.