Factsheet for GSMUA_Achr1P19640_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19270_001	Banana	plastid	86.13	85.9
Os08t0327400-01	Rice	plastid	80.89	82.4
PGSC0003DMT400029759	Potato	extracellular	68.06	81.5
KXG25034	Sorghum	plastid	78.8	81.13
HORVU7Hr1G085220.11	Barley	plastid	78.53	80.65
TraesCS7B01G258300.1	Wheat	plastid	79.06	80.32
TraesCS7D01G352900.1	Wheat	golgi, plastid	78.8	80.05
TraesCS7A01G370200.1	Wheat	plastid	78.8	80.05
Zm00001d019926_P004	Maize	plastid	77.75	79.41
KXG35263	Sorghum	plastid	77.75	79.41
Os09t0277800-01	Rice	plastid	76.7	78.98
TraesCS5B01G170100.1	Wheat	golgi, plastid	77.23	78.88
TraesCS5A01G172700.1	Wheat	plastid	77.23	78.88
TraesCS5D01G177200.1	Wheat	plastid	76.96	78.61
Zm00001d049975_P001	Maize	plastid	71.99	71.99
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	53.66	71.93
VIT_06s0004g01310.t01	Wine grape	plastid	73.04	71.17
GSMUA_Achr3P11700_001	Banana	plastid	55.24	71.04
CDY33402	Canola	plastid	68.59	71.0
CDY18037	Canola	plastid	68.32	70.92
PGSC0003DMT400081904	Potato	plastid	72.51	70.66
AT2G05990.1	Thale cress	plastid	71.99	70.51
Solyc10g078740.1.1	Tomato	plastid	72.25	70.41
Solyc01g006450.2.1	Tomato	plastid	72.25	70.41
CDY50414	Canola	plastid	69.11	69.11
CDX93100	Canola	plastid	71.2	69.04
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	70.16	68.37
KRH46610	Soybean	plastid	69.9	67.94
HORVU5Hr1G053010.2	Barley	plastid	77.23	66.0
Bra013160.1-P	Field mustard	plastid	65.97	65.45
Bra013159.1-P	Field mustard	plastid	65.71	65.36
KRG99594	Soybean	cytosol	69.63	62.0
KRH24187	Soybean	nucleus	69.63	57.7
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	73.04	56.14
Zm00001d030275_P001	Maize	plastid	13.87	38.13
Zm00001d030276_P001	Maize	plastid	13.87	38.13
Zm00001d030277_P001	Maize	cytosol, plastid	11.52	36.97
Zm00001d030274_P001	Maize	cytosol	3.66	20.59

Protein Annotations

EnsemblPlants:GSMUA_Achr1P19640_001	EnsemblPlants:GSMUA_Achr1T19640_001	EnsemblPlantsGene:GSMUA_Achr1G19640_001	Gene3D:1.10.8.400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	PFAM:PF13561	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002955AEF	UniProt:M0S1C2	MapMan:5.1.4.5	:	:

Description

Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G19640_001]

Coordinates

chr1:-:14705550..14709386

Molecular Weight (calculated)

40396.1 Da

IEP (calculated)

9.332

GRAVY (calculated)

-0.015

Length

382 amino acids

Sequence
(BLAST)

001: MGASAAAGLH VVVARPCASS PGRMFMSRTA FSRINLKGAS QGLANSSSIF SIRSPCERYS SKYCRVVTRA MSGESEGRTA YGLPIDLRGK RAFIAGVADD
101: NGYGWAIAKA LAAAGAEILV GTWVPALNIF ETSLRRGKFD ESRRLPNGSL MHIAKVYPLD AVYDSPEDVP EDVKTNKRYA GSSNWTVQEA AESVKNDFGS
201: IDILVHSLAN GPEVTKPLLE TSRRGYLAAI SASSYSFVSL LQHFLPIMNP GGATVSLTYI ASERTIPGYG GGMSSAKAAL ESDTRVLAFE AGRKGQIRVN
301: TISAGPLGSR AAKAIGFIEK MIDYSYSNAP LQKELLADEV GNTAAFLVSP LASAVTGSVV YVDNGLNTMG LAIDSRALAT QN

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.