Factsheet for Os09t0277800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G170100.1	Wheat	golgi, plastid	90.3	89.57
TraesCS5D01G177200.1	Wheat	plastid	90.03	89.3
TraesCS5A01G172700.1	Wheat	plastid	89.76	89.04
KXG35263	Sorghum	plastid	88.95	88.24
Zm00001d019926_P004	Maize	plastid	87.6	86.9
Os08t0327400-01	Rice	plastid	85.71	84.8
PGSC0003DMT400029759	Potato	extracellular	70.35	81.82
GSMUA_Achr1P19640_001	Banana	plastid	78.98	76.7
GSMUA_Achr4P19270_001	Banana	plastid	78.44	75.98
HORVU5Hr1G053010.2	Barley	plastid	90.57	75.17
CDY33402	Canola	plastid	71.16	71.54
CDY18037	Canola	plastid	70.89	71.47
Solyc10g078740.1.1	Tomato	plastid	75.47	71.43
AT2G05990.1	Thale cress	plastid	74.12	70.51
VIT_06s0004g01310.t01	Wine grape	plastid	74.39	70.41
CDX93100	Canola	plastid	73.85	69.54
KRH46610	Soybean	plastid	73.05	68.96
CDY50414	Canola	plastid	70.89	68.85
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	72.51	68.62
Solyc01g006450.2.1	Tomato	plastid	72.51	68.62
PGSC0003DMT400081904	Potato	plastid	72.51	68.62
Bra013159.1-P	Field mustard	plastid	69.54	67.19
Bra013160.1-P	Field mustard	plastid	69.0	66.49
GSMUA_Achr3P11700_001	Banana	plastid	51.48	64.31
KRG99594	Soybean	cytosol	72.78	62.94
KRH24187	Soybean	nucleus	71.7	57.7
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	72.24	53.92

Protein Annotations

Gene3D:1.10.8.400	Gene3D:3.40.50.720	EntrezGene:4346596	MapMan:5.1.4.5	EMBL:AK103141	ProteinID:BAD26009.1
ProteinID:BAF24666.1	ProteinID:BAT07201.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004318	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016491	GO:GO:0016740	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os09g0277800	EnsemblPlants:Os09t0277800-01
PFAM:PF13561	PRINTS:PR00081	PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	UniProt:Q6H5J0	InterPro:SDR_fam
SUPFAM:SSF51735	UniParc:UPI00003B45BC	RefSeq:XP_015610600.1	SEG:seg	:	:

Description

Similar to Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase). (Os09t0277800-01)

Coordinates

chr9:+:5781847..5785946

Molecular Weight (calculated)

39022.8 Da

IEP (calculated)

9.384

GRAVY (calculated)

0.047

Length

371 amino acids

Sequence
(BLAST)

001: MGASVTTGLQ MAAARPCIPA CQRLLGSRAA LPSFGRALST QTGFASCRKT ASAGPFVSLN HKRFAVRAMS AQGLPIDLRG KRAFIAGVAD DNGYGWAIAK
101: ALAAAGAEIL VGTWVPALNI FETSLRRGKF DESRKLPDGS LMEITKVYPL DAVFDSPEDV PDDVKANKRY AGSSNWTVKE VAETVKNDFG TIDILVHSLA
201: NGPEVKNSLL ETSRKGYLAA VSASSYSFIS LLQHFLPIMN PGGATISLTY IASERTIPGY GGGMSSAKAA LESDTRVLAY EAGRKGKIRV NTISAGPLGS
301: RAAKAIGFIE KMIEYSYVNA PLQKELLADE VGNTAAFLAS PLASAITGST IYVDNGLNTM GLALDSPTLS T

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.