CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99594	Soybean	cytosol	96.44	88.34
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	80.66	80.87
VIT_06s0004g01310.t01	Wine grape	plastid	78.12	78.32
Solyc01g006450.2.1	Tomato	plastid	75.57	75.77
PGSC0003DMT400081904	Potato	plastid	75.32	75.51
CDY33402	Canola	plastid	69.97	74.53
CDY18037	Canola	plastid	69.72	74.46
Os09t0277800-01	Rice	plastid	68.96	73.05
Os08t0327400-01	Rice	plastid	68.7	72.0
Zm00001d019926_P004	Maize	plastid	68.45	71.93
TraesCS5A01G172700.1	Wheat	plastid	68.45	71.93
TraesCS5D01G177200.1	Wheat	plastid	68.45	71.93
AT2G05990.1	Thale cress	plastid	71.25	71.79
TraesCS5B01G170100.1	Wheat	golgi, plastid	68.19	71.66
KXG35263	Sorghum	plastid	68.19	71.66
KXG25034	Sorghum	plastid	67.43	71.43
HORVU7Hr1G085220.11	Barley	plastid	67.18	70.97
TraesCS7A01G370200.1	Wheat	plastid	67.18	70.21
TraesCS7D01G352900.1	Wheat	golgi, plastid	67.18	70.21
CDY50414	Canola	plastid	68.19	70.16
TraesCS7B01G258300.1	Wheat	plastid	66.92	69.95
GSMUA_Achr1P19640_001	Banana	plastid	67.94	69.9
CDX93100	Canola	plastid	69.97	69.8
GSMUA_Achr4P19270_001	Banana	plastid	66.67	68.41
Zm00001d030591_P001	Maize	endoplasmic reticulum, plasma membrane	49.11	67.72
Bra013159.1-P	Field mustard	plastid	66.16	67.71
Bra013160.1-P	Field mustard	plastid	66.16	67.53
KRH24187	Soybean	nucleus	77.86	66.38
Zm00001d049975_P001	Maize	plastid	62.34	64.14
HORVU5Hr1G053010.2	Barley	plastid	68.45	60.18
GSMUA_Achr3P11700_001	Banana	plastid	43.26	57.24
Zm00001d030275_P001	Maize	plastid	12.72	35.97
Zm00001d030276_P001	Maize	plastid	12.72	35.97
Zm00001d030277_P001	Maize	cytosol, plastid	10.69	35.29
Zm00001d030274_P001	Maize	cytosol	3.56	20.59

Protein Annotations

EMBL:ACUP02005351	EnsemblPlants:KRH46610	EnsemblPlantsGene:GLYMA_08G345900	EntrezGene:100810475	Gene3D:1.10.8.400	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43159	PANTHER:PTHR43159:SF1	PFAM:PF13561	PRINTS:PR00081
ProteinID:KRH46609.1	ProteinID:KRH46610	ProteinID:KRH46610.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0000F050B5
UniProt:I1KZ09	MapMan:5.1.4.5	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:46075478..46081407

Molecular Weight (calculated)

41695.0 Da

IEP (calculated)

8.853

GRAVY (calculated)

-0.024

Length

393 amino acids

Sequence
(BLAST)

001: MATTVSNLPT AMSRPKIPSS QRIANVGPAL LGARSKVGSC YKLASVCHVA SAQPFQQGLT MTSGAVKYDK IITKAMSESS SNKEVAGLPI DLKGKRAFIA
101: GVADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFESSLR RGKFDESRKL QDGSLMEIAK VYPLDAVYDS PEDVPEDVKA NKRYAGATNW TVQEVAESVK
201: KDFGTIDILV HSLANGPEVS KLLSETSRKG YLAALSASSY SYISLLKHFL PIMNPDGSAI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAFEAGRKK
301: RIRVNTISAG PLGSRAAKAI GFIDMMIDYS FTNAPLQKEL HAEEVGNTAA FLSSPLASAI TGAVIYVDNG LNAMGVGVDS PIFKELDIPK EHH

Best Arabidopsis Sequence Match ( AT2G05990.1 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.