Factsheet for Os08t0327400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339
extracellular: 21255809
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25034	Sorghum	plastid	88.0	88.95
HORVU7Hr1G085220.11	Barley	plastid	88.0	88.71
TraesCS7D01G352900.1	Wheat	golgi, plastid	88.53	88.3
TraesCS7A01G370200.1	Wheat	plastid	88.27	88.03
TraesCS7B01G258300.1	Wheat	plastid	88.0	87.77
Os09t0277800-01	Rice	plastid	84.8	85.71
PGSC0003DMT400029759	Potato	extracellular	70.13	82.45
GSMUA_Achr1P19640_001	Banana	plastid	82.4	80.89
Zm00001d049975_P001	Maize	plastid	80.8	79.32
GSMUA_Achr4P19270_001	Banana	plastid	80.8	79.11
CDY33402	Canola	plastid	71.2	72.36
CDY18037	Canola	plastid	70.93	72.28
Solyc10g078740.1.1	Tomato	plastid	75.2	71.94
VIT_06s0004g01310.t01	Wine grape	plastid	75.2	71.94
CDX93100	Canola	plastid	74.67	71.07
AT2G05990.1	Thale cress	plastid	73.6	70.77
PGSC0003DMT400081904	Potato	plastid	73.6	70.41
Solyc01g006450.2.1	Tomato	plastid	73.6	70.41
CDY50414	Canola	plastid	71.47	70.16
KRH29159	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	72.53	69.39
KRH46610	Soybean	plastid	72.0	68.7
Bra013159.1-P	Field mustard	plastid	69.33	67.71
Bra013160.1-P	Field mustard	plastid	69.07	67.27
GSMUA_Achr3P11700_001	Banana	plastid	52.0	65.66
KRG99594	Soybean	cytosol	71.73	62.7
KRH24187	Soybean	nucleus	72.8	59.22
VIT_08s0007g06390.t01	Wine grape	golgi, plasma membrane, vacuole	74.4	56.14

Protein Annotations

Gene3D:1.10.8.400	Gene3D:3.40.50.720	EntrezGene:4345286	MapMan:5.1.4.5	EMBL:AK070992	ProteinID:BAD03449.1
ProteinID:BAD03622.1	ProteinID:BAF23471.1	ProteinID:BAT04915.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004318
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0016740	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os08g0327400
EnsemblPlants:Os08t0327400-01	PFAM:PF13561	PRINTS:PR00081	PANTHER:PTHR43159	PANTHER:PTHR43159:SF3	UniProt:Q6Z0I4
InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI00002260FE	RefSeq:XP_015648059.1	RefSeq:XP_015648060.1	SEG:seg

Description

Similar to Enoyl-ACP reductase (Fragment). (Os08t0327400-01)

Coordinates

chr8:+:14414336..14418991

Molecular Weight (calculated)

39132.9 Da

IEP (calculated)

8.963

GRAVY (calculated)

0.063

Length

375 amino acids

Sequence
(BLAST)

001: MGASAATGMQ MVAARPCISA SQGMLTSRAA VSRIGRALST TTGFATCPRI CYSSPLGSSK RSGVAIRAMS SESGPQGLPI DLRGKRAFIA GVADDNGYGW
101: AIAKALAAAG AEILVGTWVP ALNIFETSLR RGKFDESRKL PDGSLMEIVK VYPLDAVYDS PEDVPEDVKG NKRYAGSSNW TVKEVAESVK NDFGSIDILV
201: HSLANGPEVT KPLLETSRRG YLAALSASSY SFVSLLQHFL PIMNPGGASI SLTYIASERA IPGYGGGMSS AKAALESDTK VLAFEAGRKG KIRVNTISAG
301: PLGSRAAKAI GFIEKMIEYS YVNAPLQKEL LADEVGNTAA FLVSPLASAI TGSTVYVDNG LNTMGLAVDS PTISS

Best Arabidopsis Sequence Match ( AT2G05990.2 )
(BLAST)

001: MAATAASSLQ IATRRPSMSS PSKILKAGTY IVGANPGNAS WDKLSCTRQL SNLGCLRNHS AVPTCKRPFS FSTRAMSESS ENKAPSGLPI DLRGKRAFIA
101: GIADDNGYGW AIAKSLAAAG AEILVGTWVP ALNIFETSLR RGKFDQSRVL PDGSLMEIKK VYALDAVFDN PEDVPEDVKT NKRYAGSSNW TVQEAAECVK
201: KDFGSIDILV HSLANGPEVS KPLLETSRKG YLAAISASSY SFVSLLRHFL PIMNPGGASI SLTYIASERI IPGYGGGMSS AKAALESDTR VLAYEAGRKS
301: NIRVNTISAG PLGSRAAKAI GFIDTMIEYS YNNGPIQKTL TADEVGNAAA FLASPLASAI TGATIYVDNG LNAMGVALDS PVFKDLNSKN

Arabidopsis Description

MOD1Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.