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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14949 Canola cytosol 62.28 90.43
Os01t0963400-01 Rice cytosol 50.3 68.85
HORVU7Hr1G010470.2 Barley cytosol 28.74 64.86
HORVU2Hr1G087710.1 Barley cytosol 30.54 62.2
AT1G76760.1 Thale cress plastid 62.28 60.47
PGSC0003DMT400061915 Potato cytosol, plastid 61.08 60.0
KRG91663 Soybean plastid 61.08 58.29
Solyc04g071560.2.1 Tomato plastid 60.48 58.05
KRH35133 Soybean plastid 59.28 56.57
VIT_18s0072g00400.t01 Wine grape plastid 58.68 56.0
GSMUA_Achr6P25720_001 Banana plastid 53.29 52.35
EES02107 Sorghum plastid 53.29 52.05
GSMUA_Achr1P13230_001 Banana extracellular 41.92 51.85
Zm00001d042017_P002 Maize plastid 51.5 51.5
TraesCS3B01G577800.1 Wheat plastid 47.9 48.78
TraesCS3A01G509000.1 Wheat plastid 47.9 48.48
TraesCS3D01G516800.1 Wheat plastid 47.31 47.88
HORVU5Hr1G116290.1 Barley plastid 35.93 43.17
HORVU3Hr1G111930.2 Barley plastid 50.3 40.58
AT1G50320.1 Thale cress plastid 27.54 25.27
AT2G15570.2 Thale cress plastid 25.75 24.71
AT4G12170.1 Thale cress extracellular 20.96 22.88
AT3G15360.1 Thale cress plastid 26.35 22.8
AT1G03680.1 Thale cress plastid 23.95 22.35
AT4G03520.1 Thale cress plastid 23.35 20.97
Protein Annotations
MapMan:10.5.8Gene3D:3.40.30.10EntrezGene:840939UniProt:A0A178WFY2ProteinID:AAD39273.1ProteinID:AEE31970.1
ArrayExpress:AT1G43560EnsemblPlantsGene:AT1G43560RefSeq:AT1G43560TAIR:AT1G43560RefSeq:AT1G43560-TAIR-GEnsemblPlants:AT1G43560.1
TAIR:AT1G43560.1EMBL:AY128276Symbol:Aty2EMBL:BT014871GO:GO:0003674GO:GO:0003824
GO:GO:0004791GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006662
GO:GO:0006950GO:GO:0008047GO:GO:0008150GO:GO:0008152GO:GO:0009416GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009628GO:GO:0009987GO:GO:0015035GO:GO:0016671
GO:GO:0019725GO:GO:0030234GO:GO:0034599GO:GO:0043085GO:GO:0045454GO:GO:0047134
GO:GO:0055114GO:GO:0098869InterPro:IPR013766RefSeq:NP_175021.2ProteinID:OAP17044.1PFAM:PF00085
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF280UniProt:Q8L7S9
SUPFAM:SSF52833TIGRFAMs:TIGR01068InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domain
UniParc:UPI00000A649B:::::
Description
Aty2Ty2 [Source:UniProtKB/TrEMBL;Acc:A0A178WFY2]
Coordinates
chr1:-:16397979..16399880
Molecular Weight (calculated)
18593.3 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.132
Length
167 amino acids
Sequence
(BLAST)
001: MAISLATAYI SPCFTPESSN SASPSRTLSS VRLPSQIRRF GSVQSPSSST RFAPLTVRAA KKQTFNSFDD LLQNSDKPVL VDFYATWCGP CQLMVPILNE
101: VSETLKDIIA VVKIDTEKYP SLANKYQIEA LPTFILFKDG KLWDRFEGAL PANQLVERIE NSLQVKQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.