Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37416 | Canola | plastid | 81.56 | 80.66 |
| AT4G03520.1 | Thale cress | plastid | 78.21 | 75.27 |
| VIT_12s0028g03850.t01 | Wine grape | cytosol | 39.66 | 51.82 |
| PGSC0003DMT400055831 | Potato | mitochondrion, plastid | 45.25 | 44.26 |
| Solyc10g008390.2.1 | Tomato | plastid | 44.69 | 43.72 |
| CDY32507 | Canola | plastid | 78.77 | 42.09 |
| Bra032547.1-P | Field mustard | plastid | 78.77 | 42.09 |
| HORVU7Hr1G119730.1 | Barley | endoplasmic reticulum | 29.61 | 42.06 |
| AT3G15360.1 | Thale cress | plastid | 44.69 | 41.45 |
| KXG20981 | Sorghum | plastid | 36.87 | 37.71 |
| TraesCS7D01G547400.1 | Wheat | plastid | 31.28 | 32.56 |
| TraesCS7A01G563600.1 | Wheat | plastid | 31.84 | 31.84 |
| AT2G15570.2 | Thale cress | plastid | 27.37 | 28.16 |
| AT4G12170.1 | Thale cress | extracellular | 22.91 | 26.8 |
| AT1G43560.1 | Thale cress | plastid | 22.35 | 23.95 |
| AT1G76760.1 | Thale cress | plastid | 22.91 | 23.84 |
| AT1G50320.1 | Thale cress | plastid | 24.02 | 23.63 |
Protein Annotations
| MapMan:10.5.5 | Gene3D:3.40.30.10 | EntrezGene:839436 | UniProt:A0A178W6J8 | ProteinID:AAF86525.1 | ProteinID:AEE27596.1 |
| EMBL:AF095749 | ArrayExpress:AT1G03680 | EnsemblPlantsGene:AT1G03680 | RefSeq:AT1G03680 | TAIR:AT1G03680 | RefSeq:AT1G03680-TAIR-G |
| EnsemblPlants:AT1G03680.1 | TAIR:AT1G03680.1 | Symbol:ATHM1 | Unigene:At.20253 | EMBL:BT004295 | EMBL:BT005525 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0004857 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006109 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008047 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010319 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0030234 | GO:GO:0034599 |
| GO:GO:0043085 | GO:GO:0043086 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0048046 | GO:GO:0055114 |
| GO:GO:0098869 | InterPro:IPR013766 | RefSeq:NP_849585.1 | UniProt:O48737 | ProteinID:OAP13928.1 | PFAM:PF00085 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF300 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI000000C325 | SEG:seg | : | : | : |
Description
ATHM1Thioredoxin M1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48737]
Coordinates
chr1:-:916772..918064
Molecular Weight (calculated)
19665.6 Da
IEP (calculated)
9.254
GRAVY (calculated)
-0.129
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYTCTSRP PISIRSEMRI ASSPTGSFST RQMFSVLPES SGLRTRVSLS SLSKNSRVSR LRRGVICEAQ DTATGIPVVN DSTWDSLVLK ADEPVFVDFW
101: APWCGPCKMI DPIVNELAQK YAGQFKFYKL NTDESPATPG QYGVRSIPTI MIFVNGEKKD TIIGAVSKDT LATSINKFL
101: APWCGPCKMI DPIVNELAQK YAGQFKFYKL NTDESPATPG QYGVRSIPTI MIFVNGEKKD TIIGAVSKDT LATSINKFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.