Factsheet for HORVU7Hr1G119730.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 2
endoplasmic reticulum 4
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G033180.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03680.1	HORVU5Hr1G033180.3	AT5G14260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G547400.1	Wheat	plastid	88.1	64.53
TraesCS7A01G563600.1	Wheat	plastid	86.51	60.89
KXG20981	Sorghum	plastid	68.25	49.14
VIT_12s0028g03850.t01	Wine grape	cytosol	42.86	39.42
HORVU2Hr1G091130.1	Barley	mitochondrion	41.27	36.62
PGSC0003DMT400055831	Potato	mitochondrion, plastid	50.0	34.43
Solyc10g008390.2.1	Tomato	plastid	49.21	33.88
HORVU5Hr1G033060.1	Barley	plastid	45.24	32.57
HORVU5Hr1G033050.1	Barley	plastid	45.24	32.57
AT1G03680.1	Thale cress	plastid	42.06	29.61
Bra000821.1-P	Field mustard	plastid	40.48	28.33
CDY48214	Canola	plastid	40.48	28.33
CDY61995	Canola	plastid	40.48	28.33
HORVU2Hr1G091200.5	Barley	cytosol	41.27	28.11
AT4G03520.1	Thale cress	plastid	41.27	27.96
CDY37416	Canola	plastid	38.89	27.07
HORVU2Hr1G087710.1	Barley	cytosol	17.46	26.83
CDY21971	Canola	plastid	38.1	26.23
Bra034214.1-P	Field mustard	plastid	38.1	26.09
CDY48565	Canola	plastid	38.1	25.81
HORVU7Hr1G010470.2	Barley	cytosol	14.29	24.32
HORVU2Hr1G075240.6	Barley	plastid	29.37	20.11
HORVU5Hr1G116290.1	Barley	plastid	20.63	18.7
HORVU3Hr1G111930.2	Barley	plastid	26.98	16.43
Bra032547.1-P	Field mustard	plastid	36.51	13.73
CDY32507	Canola	plastid	36.51	13.73

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	UniProt:A0A287XZZ4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G119730	EnsemblPlants:HORVU7Hr1G119730.1	InterPro:IPR013766
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF356	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000B468890	:	:	:	:

Description

Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A287XZZ4]

Coordinates

chrchr7H:-:650072234..650072831

Molecular Weight (calculated)

13910.9 Da

IEP (calculated)

5.169

GRAVY (calculated)

0.283

Length

126 amino acids

Sequence
(BLAST)

001: SASRVNILIL VQHKPACLFA LAVGDVEEQT WDEVVLGCET AVLVEFWAPW CGPCRLMHPI IADLAKAYAG RLRCLRVNTD ENQEVATRYG IRSIPTILIF
101: KDGERKETVI GAIADTALAA TVDRFL

Best Arabidopsis Sequence Match ( AT3G15360.1 )
(BLAST)

001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE

Arabidopsis Description

ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.