Factsheet for HORVU2Hr1G075240.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G303200.1	Wheat	plastid	92.93	79.91
Os04t0430800-01	Rice	plastid	68.48	72.0
EES12176	Sorghum	plastid	74.46	71.73
Zm00001d003667_P002	Maize	plastid	71.74	70.21
TraesCS2D01G301800.1	Wheat	plastid	90.22	68.03
GSMUA_Achr3P02940_001	Banana	extracellular	42.39	67.83
GSMUA_Achr11P...	Banana	cytosol	25.0	63.01
PGSC0003DMT400066596	Potato	plastid	39.67	40.56
Solyc01g108020.2.1	Tomato	plastid	39.13	40.0
CDX68513	Canola	plastid	34.24	36.84
CDY36637	Canola	plastid	34.24	36.84
VIT_03s0063g00280.t01	Wine grape	plastid	34.24	36.63
Bra015223.1-P	Field mustard	plastid	33.7	36.26
AT2G15570.2	Thale cress	plastid	33.7	35.63
KRH50300	Soybean	plastid	33.15	35.06
KRH70646	Soybean	plastid	32.07	34.91
HORVU2Hr1G091130.1	Barley	mitochondrion	26.63	34.51
HORVU5Hr1G033060.1	Barley	plastid	28.8	30.29
HORVU5Hr1G033050.1	Barley	plastid	28.8	30.29
HORVU7Hr1G010470.2	Barley	cytosol	11.96	29.73
HORVU7Hr1G119730.1	Barley	endoplasmic reticulum	20.11	29.37
HORVU2Hr1G087710.1	Barley	cytosol	13.04	29.27
HORVU2Hr1G091200.5	Barley	cytosol	26.63	26.49
HORVU5Hr1G116290.1	Barley	plastid	16.3	21.58
HORVU3Hr1G111930.2	Barley	plastid	23.91	21.26

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	UniProt:A0A287IH25	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006662	GO:GO:0008047	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0030234	GO:GO:0043085	GO:GO:0045454	GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G075240	EnsemblPlants:HORVU2Hr1G075240.6	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF233	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01068
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000B463199	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:542376267..542379294

Molecular Weight (calculated)

20257.0 Da

IEP (calculated)

8.631

GRAVY (calculated)

-0.224

Length

184 amino acids

Sequence
(BLAST)

001: MAAAASRHLC CATALLSPSA AAAPIRRRVG YGYGYGSSST RRWPCRRWAH GPDAASRIRR PTTGSSTARV SCAYSTGAEA ITACSWNQNV ICSDVPVLVE
101: FWASWCGPCK MVHRIVDEIA NEYDGRIKCY KLDTDDYPQT ATSYNIERVP TVLLFKDGEK IHSITGTLPK AVYVRAIENS FLEQ

Best Arabidopsis Sequence Match ( AT2G15570.1 )
(BLAST)

001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS

Arabidopsis Description

ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.