CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015223.1-P	Field mustard	plastid	97.66	97.66
CDX68513	Canola	plastid	97.66	97.66
AT2G15570.2	Thale cress	plastid	85.96	84.48
VIT_03s0063g00280.t01	Wine grape	plastid	54.97	54.65
GSMUA_Achr11P...	Banana	cytosol	22.81	53.42
GSMUA_Achr3P02940_001	Banana	extracellular	33.92	50.43
KRH50300	Soybean	plastid	50.88	50.0
Solyc01g108020.2.1	Tomato	plastid	50.88	48.33
PGSC0003DMT400066596	Potato	plastid	50.88	48.33
KRH70646	Soybean	plastid	47.37	47.93
Os04t0430800-01	Rice	plastid	38.01	37.14
Zm00001d003667_P002	Maize	plastid	38.01	34.57
EES12176	Sorghum	plastid	38.6	34.55
HORVU2Hr1G075240.6	Barley	plastid	36.84	34.24
TraesCS2A01G303200.1	Wheat	plastid	36.84	29.44
CDY48214	Canola	plastid	29.82	28.33
CDY61995	Canola	plastid	29.82	28.33
CDX97662	Canola	plastid	30.99	27.6
CDX98554	Canola	plastid	30.99	27.6
CDY48565	Canola	plastid	29.82	27.42
CDY14949	Canola	cytosol	18.13	26.96
CDY21971	Canola	plastid	28.66	26.78
TraesCS2D01G301800.1	Wheat	plastid	38.01	26.64
CDY37416	Canola	plastid	28.07	26.52
CDY30839	Canola	endoplasmic reticulum, extracellular, plasma membrane	23.39	25.32
CDX88314	Canola	plastid	25.15	25.0
CDX87569	Canola	plastid	25.15	25.0
CDY65035	Canola	cytosol	16.96	21.97
CDX82437	Canola	endoplasmic reticulum	15.79	21.43
CDY22789	Canola	plastid	22.81	21.43
CDY24127	Canola	cytosol	15.79	21.26
CDY42508	Canola	plastid	22.22	21.11
CDX75826	Canola	endoplasmic reticulum	15.2	20.47
CDY62030	Canola	endoplasmic reticulum, extracellular, vacuole	13.45	16.79
CDY32507	Canola	plastid	26.9	13.73

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	GO:A0A078HFQ6	UniProt:A0A078HFQ6	EnsemblPlants:CDY36637	ProteinID:CDY36637
ProteinID:CDY36637.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00062377001	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF233	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EF1C0A	SEG:seg	:	:

Description

BnaA07g04200DBnaA07g04200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFQ6]

Coordinates

chrLK032380:-:93832..95183

Molecular Weight (calculated)

18886.6 Da

IEP (calculated)

8.196

GRAVY (calculated)

-0.033

Length

171 amino acids

Sequence
(BLAST)

001: MAVSSSSMCL NAGRLPPARS ISSPSRLFPV TSFSPRSLLL SDRRSLVSSS GSRLRFSALC VRDSKAAEVT QSSWENSVLK SETPVLVEFY TSWCGPCRMV
101: HRIINEIAGD YAGKLNCYVL DADSDSFVAE EYEIKAVPVV LLFKNGEKRE SIMGTMPKEF YISAIERVLN S

Best Arabidopsis Sequence Match ( AT2G15570.1 )
(BLAST)

001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS

Arabidopsis Description

ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.