CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97662	Canola	plastid	97.92	97.92
Bra027250.1-P	Field mustard	plastid	96.88	96.88
CDX82437	Canola	endoplasmic reticulum	48.44	73.81
CDX75826	Canola	endoplasmic reticulum	46.88	70.87
VIT_00s0238g00110.t01	Wine grape	cytosol	22.92	61.97
KRH55312	Soybean	nucleus, plastid	47.92	54.44
KRH26086	Soybean	plastid	48.44	53.14
PGSC0003DMT400039743	Potato	plastid	48.44	51.96
Solyc12g013810.1.1	Tomato	plastid	47.92	51.4
PGSC0003DMT400032333	Potato	cytosol, extracellular, mitochondrion, plastid	48.44	51.1
Solyc07g063190.2.1	Tomato	plastid	47.92	50.55
VIT_19s0014g02890.t01	Wine grape	plastid	48.44	49.47
KRH27229	Soybean	plastid	46.88	49.45
KRH22105	Soybean	plastid	46.88	49.45
PGSC0003DMT400064434	Potato	plastid	45.31	46.52
HORVU2Hr1G091130.1	Barley	mitochondrion	34.38	46.48
Solyc10g006970.2.1	Tomato	plastid	44.79	45.99
CDY37416	Canola	plastid	41.67	44.2
GSMUA_Achr1P00150_001	Banana	plastid	43.23	44.15
CDY48214	Canola	plastid	40.62	43.33
CDY21971	Canola	plastid	41.15	43.17
EES07212	Sorghum	plastid	39.06	43.1
Zm00001d002854_P001	Maize	plastid	40.62	42.86
CDY61995	Canola	plastid	40.1	42.78
Zm00001d051250_P001	Maize	plastid	38.54	42.77
Zm00001d017379_P001	Maize	plastid	38.54	42.77
CDY48565	Canola	plastid	41.15	42.47
TraesCS2D01G368700.1	Wheat	plastid	39.06	41.21
Os04t0530600-01	Rice	plastid	38.54	41.11
GSMUA_Achr5P20730_001	Banana	plastid	40.1	40.53
TraesCS2A01G372500.1	Wheat	plastid	38.54	40.22
TraesCS2B01G389500.1	Wheat	plastid	38.54	40.0
Os02t0639900-01	Rice	plastid	35.94	39.88
EES12552	Sorghum	plastid	38.54	39.78
GSMUA_Achr11P...	Banana	plastid	36.98	39.01
HORVU2Hr1G091200.5	Barley	cytosol	34.38	35.68
CDY30839	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.6	33.54
GSMUA_Achr5P12100_001	Banana	plastid	42.19	32.93
GSMUA_Achr4P29990_001	Banana	plastid	40.62	32.91
CDY14949	Canola	cytosol	19.27	32.17
CDX68513	Canola	plastid	28.12	31.58
CDY36637	Canola	plastid	27.6	30.99
CDY24127	Canola	cytosol	19.27	29.13
CDX88314	Canola	plastid	26.04	29.07
CDX87569	Canola	plastid	25.52	28.49
CDY42508	Canola	plastid	26.56	28.33
CDY22789	Canola	plastid	26.04	27.47
CDY65035	Canola	cytosol	18.75	27.27
CDY32507	Canola	plastid	39.58	22.69
CDY62030	Canola	endoplasmic reticulum, extracellular, vacuole	15.1	21.17

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	GO:A0A078ECS2	EnsemblPlants:CDX98554	ProteinID:CDX98554	ProteinID:CDX98554.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00106211001
InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF367	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0004EEC6A1	:	:	:	:

Description

BnaC05g38210D

Coordinates

chrLK031905:+:980804..982222

Molecular Weight (calculated)

21074.2 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.094

Length

192 amino acids

Sequence
(BLAST)

001: MASLLDSVTV TRVFSLPITS SISPASKVPS ISARRISPVP EFRGLKASWR SSVTQSASLG TNLGSRFARG GRIVCEAQDT TAAAVEVPNI SDSEWQTQVL
101: ESDVPVLVEF WAPWCGPCRM IHPIVDQLAR DFAGKFKFYK INTDESPNTA NRYGIRSVPT VIIFKDGEKK DSIIGAVPKE TLEKTIERFV VE

Best Arabidopsis Sequence Match ( AT3G15360.1 )
(BLAST)

001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE

Arabidopsis Description

ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.