Factsheet for Bra027250.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97662	Canola	plastid	98.44	98.44
CDX98554	Canola	plastid	96.88	96.88
Bra001592.1-P	Field mustard	extracellular, plasma membrane	65.62	77.3
VIT_00s0238g00110.t01	Wine grape	cytosol	23.44	63.38
KRH55312	Soybean	nucleus, plastid	47.92	54.44
KRH26086	Soybean	plastid	48.44	53.14
PGSC0003DMT400032333	Potato	cytosol, extracellular, mitochondrion, plastid	49.48	52.2
PGSC0003DMT400039743	Potato	plastid	48.44	51.96
Solyc07g063190.2.1	Tomato	plastid	48.96	51.65
Solyc12g013810.1.1	Tomato	plastid	47.92	51.4
KRH22105	Soybean	plastid	47.4	50.0
VIT_19s0014g02890.t01	Wine grape	plastid	48.96	50.0
KRH27229	Soybean	plastid	47.4	50.0
HORVU2Hr1G091130.1	Barley	mitochondrion	34.9	47.18
PGSC0003DMT400064434	Potato	plastid	45.83	47.06
Solyc10g006970.2.1	Tomato	plastid	45.31	46.52
GSMUA_Achr1P00150_001	Banana	plastid	43.75	44.68
Bra000821.1-P	Field mustard	plastid	41.15	43.89
EES07212	Sorghum	plastid	39.58	43.68
Zm00001d002854_P001	Maize	plastid	41.15	43.41
Zm00001d051250_P001	Maize	plastid	39.06	43.35
Zm00001d017379_P001	Maize	plastid	39.06	43.35
Bra034214.1-P	Field mustard	plastid	41.15	42.93
TraesCS2D01G368700.1	Wheat	plastid	39.58	41.76
Os04t0530600-01	Rice	plastid	39.06	41.67
TraesCS2A01G372500.1	Wheat	plastid	39.06	40.76
TraesCS2B01G389500.1	Wheat	plastid	39.06	40.54
GSMUA_Achr5P20730_001	Banana	plastid	40.1	40.53
Os02t0639900-01	Rice	plastid	36.46	40.46
EES12552	Sorghum	plastid	39.06	40.32
GSMUA_Achr11P...	Banana	plastid	37.5	39.56
HORVU2Hr1G091200.5	Barley	cytosol	34.9	36.22
GSMUA_Achr4P29990_001	Banana	plastid	41.15	33.33
GSMUA_Achr5P12100_001	Banana	plastid	42.71	33.33
Bra015223.1-P	Field mustard	plastid	27.08	30.41
Bra015721.1-P	Field mustard	plastid	26.04	29.07
Bra018842.1-P	Field mustard	plastid	26.56	28.02
Bra019005.1-P	Field mustard	extracellular	18.75	26.09
Bra032547.1-P	Field mustard	plastid	40.1	22.99

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra027250	EnsemblPlants:Bra027250.1	EnsemblPlants:Bra027250.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4EEN8	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF367	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0002547A2D	:	:	:	:

Description

AT3G15360 (E=9e-089) ATHM4, TRX-M4, ATM4 | TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator

Coordinates

chrA05:-:19943842..19945082

Molecular Weight (calculated)

20953.0 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.094

Length

192 amino acids

Sequence
(BLAST)

001: MASFLDSVTV TRVFSLPITS SISPASKVPS VSARRISPVP EFRGLKASQK SSVTQSASLG TSLGSRFARG GRIVCEAQDT TAAAVEVPNI SDSEWQTQVL
101: ESDVPVLVEF WAPWCGPCRM IHPIVDQLAK DFAGKFKFYK INTDESPNTA NRYGIRSVPT VIIFKDGEKK DSIIGAVPKE TLEKTIERFV VE

Best Arabidopsis Sequence Match ( AT3G15360.1 )
(BLAST)

001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE

Arabidopsis Description

ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.