Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra012337.1-P | |
| Bra024526.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G03520.1 | Bra012337.1-P | AT1G22640.1 | 21798944 |
| AT4G03520.1 | Bra024526.1-P | AT1G22640.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61995 | Canola | plastid | 100.0 | 100.0 |
| CDY48214 | Canola | plastid | 96.11 | 96.11 |
| Bra034214.1-P | Field mustard | plastid | 85.0 | 83.15 |
| AT4G03520.1 | Thale cress | plastid | 79.44 | 76.88 |
| VIT_12s0028g03850.t01 | Wine grape | cytosol | 42.22 | 55.47 |
| PGSC0003DMT400055831 | Potato | mitochondrion, plastid | 47.78 | 46.99 |
| Solyc10g008390.2.1 | Tomato | plastid | 46.67 | 45.9 |
| Bra001592.1-P | Field mustard | extracellular, plasma membrane | 38.89 | 42.94 |
| Bra027250.1-P | Field mustard | plastid | 43.89 | 41.15 |
| HORVU7Hr1G119730.1 | Barley | endoplasmic reticulum | 28.33 | 40.48 |
| Bra032547.1-P | Field mustard | plastid | 67.78 | 36.42 |
| KXG20981 | Sorghum | plastid | 35.0 | 36.0 |
| TraesCS7D01G547400.1 | Wheat | plastid | 30.0 | 31.4 |
| TraesCS7A01G563600.1 | Wheat | plastid | 30.0 | 30.17 |
| Bra015223.1-P | Field mustard | plastid | 27.78 | 29.24 |
| Bra015721.1-P | Field mustard | plastid | 25.0 | 26.16 |
| Bra018842.1-P | Field mustard | plastid | 23.89 | 23.63 |
| Bra019005.1-P | Field mustard | extracellular | 17.78 | 23.19 |
Protein Annotations
| MapMan:10.5.5 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra000821 | EnsemblPlants:Bra000821.1 | EnsemblPlants:Bra000821.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 |
| UniProt:M4C9E2 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF300 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI000254051F | SEG:seg | : | : | : |
Description
AT4G03520 (E=2e-068) ATHM2 | ATHM2; enzyme activator
Coordinates
chrA03:+:13346668..13347457
Molecular Weight (calculated)
19671.6 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.179
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFTCTSRP PVSLRSESRI ASSPSASLSA RRMFTLSPDS AGLRIRLSQS PSSLTSKVPR PRRGIVCEAQ ETTTDISIVN DTTWDSLVLK ADGPVLVDFW
101: APWCGPCKMI DPLVNELAKE YTGKVKFYKL NTDDSPSTPS KYNVRSIPTI MIFVNGEKKD AIIGAVPRST LASSIDKFLQ
101: APWCGPCKMI DPLVNELAKE YTGKVKFYKL NTDDSPSTPS KYNVRSIPTI MIFVNGEKKD AIIGAVPRST LASSIDKFLQ
001: MAAFTCTSRP PISLRSETRI VSSSPSASSL SSRRMFAVLP ESSGLRIRLS LSPASLTSIH QPRVSRLRRA VVCEAQETTT DIQVVNDSTW DSLVLKATGP
101: VVVDFWAPWC GPCKMIDPLV NDLAQHYTGK IKFYKLNTDE SPNTPGQYGV RSIPTIMIFV GGEKKDTIIG AVPKTTLTSS LDKFLP
101: VVVDFWAPWC GPCKMIDPLV NDLAQHYTGK IKFYKLNTDE SPNTPGQYGV RSIPTIMIFV GGEKKDTIIG AVPKTTLTSS LDKFLP
Arabidopsis Description
ATHM2Thioredoxin M2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEU8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.