Factsheet for TraesCS7D01G547400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G106100.1
TraesCS5B01G110900.1
TraesCS5D01G123700.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03680.1	TraesCS5A01G106100.1	AT5G14260.1	21798944
AT1G03680.1	TraesCS5B01G110900.1	AT5G14260.1	21798944
AT1G03680.1	TraesCS5D01G123700.2	AT5G14260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G563600.1	Wheat	plastid	94.77	91.06
HORVU7Hr1G119730.1	Barley	endoplasmic reticulum	64.53	88.1
KXG20981	Sorghum	plastid	58.72	57.71
PGSC0003DMT400055831	Potato	mitochondrion, plastid	43.02	40.44
Solyc10g008390.2.1	Tomato	plastid	41.86	39.34
VIT_12s0028g03850.t01	Wine grape	cytosol	30.81	38.69
TraesCS5D01G118500.1	Wheat	plastid	37.21	36.57
TraesCS2D01G368700.1	Wheat	plastid	34.3	32.42
AT1G03680.1	Thale cress	plastid	32.56	31.28
CDY48214	Canola	plastid	31.4	30.0
CDY61995	Canola	plastid	31.4	30.0
Bra000821.1-P	Field mustard	plastid	31.4	30.0
CDY37416	Canola	plastid	31.4	29.83
AT4G03520.1	Thale cress	plastid	31.98	29.57
CDY21971	Canola	plastid	29.65	27.87
Bra034214.1-P	Field mustard	plastid	29.65	27.72
CDY48565	Canola	plastid	29.65	27.42
TraesCS2D01G559200.1	Wheat	plastid	22.67	22.54
TraesCS3D01G516800.1	Wheat	plastid	21.51	22.42
TraesCS2D01G301800.1	Wheat	plastid	26.16	18.44
CDY32507	Canola	plastid	29.65	15.22
Bra032547.1-P	Field mustard	plastid	29.65	15.22

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF356
SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS7D01G547400	EnsemblPlants:TraesCS7D01G547400.1	TIGR:cd02947	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:633516344..633518381

Molecular Weight (calculated)

18126.7 Da

IEP (calculated)

8.385

GRAVY (calculated)

-0.055

Length

172 amino acids

Sequence
(BLAST)

001: MPAATAISLS PGPSAARRPT NPLHRAASSP SCFNPPQPGR PPTGGAVAAS AGRRVARCKA AGPSAADHVG DVEEQTWDEV VLGCETAVLV AFWAPWCGPC
101: RLMHPIIADL AKAYAGRLRC LRVNTDENQE VASRYGIRSI PTILIFKDGE RKETVIGAIA DTALAATVDR FL

Best Arabidopsis Sequence Match ( AT3G15360.1 )
(BLAST)

001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE

Arabidopsis Description

ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.