Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES01150 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G03680.1 | EES01150 | AT5G14260.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G119730.1 | Barley | endoplasmic reticulum | 49.14 | 68.25 |
| TraesCS7D01G547400.1 | Wheat | plastid | 57.71 | 58.72 |
| TraesCS7A01G563600.1 | Wheat | plastid | 58.86 | 57.54 |
| VIT_12s0028g03850.t01 | Wine grape | cytosol | 34.29 | 43.8 |
| PGSC0003DMT400055831 | Potato | mitochondrion, plastid | 44.57 | 42.62 |
| Solyc10g008390.2.1 | Tomato | plastid | 44.0 | 42.08 |
| EES12552 | Sorghum | plastid | 41.71 | 39.25 |
| EES07212 | Sorghum | plastid | 38.86 | 39.08 |
| EES16784 | Sorghum | plastid | 39.43 | 37.7 |
| AT1G03680.1 | Thale cress | plastid | 37.71 | 36.87 |
| CDY37416 | Canola | plastid | 37.14 | 35.91 |
| Bra000821.1-P | Field mustard | plastid | 36.0 | 35.0 |
| CDY48214 | Canola | plastid | 36.0 | 35.0 |
| CDY61995 | Canola | plastid | 36.0 | 35.0 |
| AT4G03520.1 | Thale cress | plastid | 36.57 | 34.41 |
| CDY48565 | Canola | plastid | 34.29 | 32.26 |
| Bra034214.1-P | Field mustard | plastid | 33.71 | 32.07 |
| CDY21971 | Canola | plastid | 33.14 | 31.69 |
| EES02107 | Sorghum | plastid | 25.14 | 25.73 |
| EES11645 | Sorghum | plastid | 25.14 | 25.14 |
| EES12176 | Sorghum | plastid | 26.29 | 24.08 |
| CDY32507 | Canola | plastid | 34.29 | 17.91 |
| Bra032547.1-P | Field mustard | plastid | 34.29 | 17.91 |
Protein Annotations
| MapMan:10.5.5 | Gene3D:3.40.30.10 | UniProt:A0A194YN14 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | EnsemblPlants:KXG20981 | ProteinID:KXG20981 |
| ProteinID:KXG20981.1 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF356 | EnsemblPlantsGene:SORBI_3010G279200 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0007F19926 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:61156697..61161836
Molecular Weight (calculated)
19002.8 Da
IEP (calculated)
8.774
GRAVY (calculated)
-0.059
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGTETIAA ATLGTRRPRH SRTAASFLSF RFRPSPQLSV AVAASASLRG KAKAHAEGAD SKASAAIDDQ HVLDVAESTW DDLVLGCECP VLVEFWAPWC
101: GPCRMMHPII ADVARAYTGR LRCLKLNTDK NQEVATRYGI RSIPTILIFK NGERKETVIG AVTDTTLATT VERFL
101: GPCRMMHPII ADVARAYTGR LRCLKLNTDK NQEVATRYGI RSIPTILIFK NGERKETVIG AVTDTTLATT VERFL
001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE
Arabidopsis Description
ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.