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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041804_P001 Maize plastid 86.34 94.61
Zm00001d023707_P002 Maize plastid 89.07 93.68
TraesCS5D01G118500.1 Wheat plastid 68.85 72.0
TraesCS5B01G111800.1 Wheat plastid 68.85 72.0
TraesCS5A01G110300.1 Wheat plastid 68.85 72.0
HORVU5Hr1G033050.1 Barley plastid 67.21 70.29
HORVU5Hr1G033060.1 Barley plastid 67.21 70.29
Os12t0188700-02 Rice plastid 64.48 68.6
VIT_18s0001g15310.t01 Wine grape plastid 54.64 54.64
KRH53365 Soybean plastid 53.55 54.14
KRH64566 Soybean plastid 53.55 54.14
KRH18101 Soybean plastid 27.87 53.68
GSMUA_Achr11P... Banana plastid 50.27 50.27
EES07212 Sorghum plastid 40.44 42.53
EES12552 Sorghum plastid 42.62 41.94
KRH15927 Soybean plastid 28.96 41.73
KXG20981 Sorghum plastid 37.7 39.43
EES12176 Sorghum plastid 31.15 29.84
EES02107 Sorghum plastid 22.95 24.56
EES11645 Sorghum plastid 21.86 22.86
Protein Annotations
MapMan:10.5.5Gene3D:3.40.30.10EntrezGene:8082775UniProt:C5YT85EnsemblPlants:EES16784ProteinID:EES16784
ProteinID:EES16784.1GO:GO:0003674GO:GO:0003824GO:GO:0004791GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006662GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009507GO:GO:0009536GO:GO:0009657GO:GO:0009987GO:GO:0015035
GO:GO:0016043GO:GO:0016671GO:GO:0019725GO:GO:0034599GO:GO:0042744GO:GO:0045454
GO:GO:0047134GO:GO:0055114GO:GO:0098869InterPro:IPR013766PFAM:PF00085PRINTS:PR00421
ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF367EnsemblPlantsGene:SORBI_3008G063100SUPFAM:SSF52833
unigene:Sbi.573TIGRFAMs:TIGR01068InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domain
UniParc:UPI0001A8802ERefSeq:XP_002442946.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:6797841..6799179
Molecular Weight (calculated)
19347.5 Da
IEP (calculated)
8.489
GRAVY (calculated)
0.144
Length
183 amino acids
Sequence
(BLAST)
001: MALETCFRAW ALHAAPAAGG KDSRLLVVGS SSGSGSNLVL PSKRAAAAAV VAPLSVGRVA TRRPRHVCQS KNAVDEVLVA DEKNWDGMVM ACETPVLVEF
101: WAPWCGPCRM IAPVIDELAK DYAGKITCCK VNTDESPNVA STYGIRSIPT VLIFKAGEKK ESVIGAVPKS TLTTLIDKYI GTS
Best Arabidopsis Sequence Match ( AT3G15360.1 )
(BLAST)
001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE
Arabidopsis Description
ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.