Factsheet for TraesCS2D01G301800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G303200.1	Wheat	plastid	81.97	93.46
HORVU2Hr1G075240.6	Barley	plastid	68.03	90.22
EES12176	Sorghum	plastid	54.92	70.16
Os04t0430800-01	Rice	plastid	49.59	69.14
Zm00001d003667_P002	Maize	plastid	52.87	68.62
GSMUA_Achr3P02940_001	Banana	extracellular	31.15	66.09
GSMUA_Achr11P...	Banana	cytosol	19.26	64.38
PGSC0003DMT400066596	Potato	plastid	30.33	41.11
Solyc01g108020.2.1	Tomato	plastid	29.92	40.56
CDY36637	Canola	plastid	26.64	38.01
CDX68513	Canola	plastid	26.64	38.01
Bra015223.1-P	Field mustard	plastid	26.23	37.43
AT2G15570.2	Thale cress	plastid	26.64	37.36
VIT_03s0063g00280.t01	Wine grape	plastid	25.82	36.63
KRH50300	Soybean	plastid	25.41	35.63
KRH70646	Soybean	plastid	24.59	35.5
TraesCS2D01G368700.1	Wheat	plastid	24.18	32.42
TraesCS5D01G118500.1	Wheat	plastid	22.13	30.86
TraesCS3D01G516800.1	Wheat	plastid	19.26	28.48
TraesCS2D01G559200.1	Wheat	plastid	20.08	28.32
TraesCS7D01G547400.1	Wheat	plastid	18.44	26.16

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF233
SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS2D01G301800	EnsemblPlants:TraesCS2D01G301800.1	TIGR:cd02947	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:-:385164077..385165634

Molecular Weight (calculated)

26706.0 Da

IEP (calculated)

9.984

GRAVY (calculated)

-0.177

Length

244 amino acids

Sequence
(BLAST)

001: MAWGASLPPP TPPVRHRTAA FALAHFPPWP SNIMSSNGPR AACCVRLVSF HPLRSPPRLP SSQIPQTMAA AASRHLCSAT ALLSPSAAAA PIRQRVGYGY
101: GSSSARRWAH RPDAASRIRR LTTRSRTARV SCAYSTGAEA ITACSWNQNV ICSDVPVLVE FWASWCGPCK MVHRIVDEIA GEYAGRIKCY KLDTDDYPQT
201: ANSYNIERVP TVLLFKDGEK IHSITGTLPK AVYVRAIENS FLQQ

Best Arabidopsis Sequence Match ( AT2G15570.1 )
(BLAST)

001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS

Arabidopsis Description

ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.