Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G075240.6 | Barley | plastid | 79.91 | 92.93 |
| TraesCS2D01G301800.1 | Wheat | plastid | 93.46 | 81.97 |
| EES12176 | Sorghum | plastid | 63.55 | 71.2 |
| Zm00001d003667_P002 | Maize | plastid | 61.68 | 70.21 |
| Os04t0430800-01 | Rice | plastid | 56.54 | 69.14 |
| GSMUA_Achr3P02940_001 | Banana | extracellular | 35.98 | 66.96 |
| GSMUA_Achr11P... | Banana | cytosol | 21.5 | 63.01 |
| PGSC0003DMT400066596 | Potato | plastid | 34.11 | 40.56 |
| Solyc01g108020.2.1 | Tomato | plastid | 33.64 | 40.0 |
| CDY36637 | Canola | plastid | 29.44 | 36.84 |
| CDX68513 | Canola | plastid | 29.44 | 36.84 |
| Bra015223.1-P | Field mustard | plastid | 28.97 | 36.26 |
| AT2G15570.2 | Thale cress | plastid | 29.44 | 36.21 |
| VIT_03s0063g00280.t01 | Wine grape | plastid | 28.97 | 36.05 |
| KRH50300 | Soybean | plastid | 28.5 | 35.06 |
| KRH70646 | Soybean | plastid | 27.57 | 34.91 |
| TraesCS2A01G372500.1 | Wheat | plastid | 27.1 | 31.52 |
| TraesCS5A01G110300.1 | Wheat | plastid | 25.23 | 30.86 |
| TraesCS2A01G555300.1 | Wheat | plastid | 22.43 | 27.91 |
| TraesCS3A01G509000.1 | Wheat | plastid | 21.5 | 27.88 |
| TraesCS7A01G563600.1 | Wheat | plastid | 21.03 | 25.14 |
Protein Annotations
| MapMan:10.5.5 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF233 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
| EnsemblPlantsGene:TraesCS2A01G303200 | EnsemblPlants:TraesCS2A01G303200.1 | TIGR:cd02947 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:520302749..520307068
Molecular Weight (calculated)
23627.3 Da
IEP (calculated)
9.188
GRAVY (calculated)
-0.207
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDGPRAAC CVRLISFHPP RSPPRLPSSQ IPQTMAAAAS RHLCSATALL SPSAAAAPIR QRVGYGSSSN RRWLCRRWAH GPDAASRIRR LTTRSRTARV
101: SCAYSTGAEA ITACSWNQNV ICSDVPVLVE FWASWCGPCK MVHRIVDEIA AEYDGRIKCY KLDTDDYPQT AISYNIERVP TVLLFKDGEK IHSITGTLPK
201: AVYVRAIENS FLEQ
101: SCAYSTGAEA ITACSWNQNV ICSDVPVLVE FWASWCGPCK MVHRIVDEIA AEYDGRIKCY KLDTDDYPQT AISYNIERVP TVLLFKDGEK IHSITGTLPK
201: AVYVRAIENS FLEQ
001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS
Arabidopsis Description
ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.