CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70646	Soybean	plastid	89.66	92.31
VIT_03s0063g00280.t01	Wine grape	plastid	53.45	54.07
GSMUA_Achr11P...	Banana	cytosol	21.84	52.05
CDX68513	Canola	plastid	50.57	51.46
Bra015223.1-P	Field mustard	plastid	50.0	50.88
CDY36637	Canola	plastid	50.0	50.88
AT2G15570.2	Thale cress	plastid	50.57	50.57
GSMUA_Achr3P02940_001	Banana	extracellular	33.33	50.43
Solyc01g108020.2.1	Tomato	plastid	45.98	44.44
PGSC0003DMT400066596	Potato	plastid	45.98	44.44
KRH18101	Soybean	plastid	20.69	37.89
KRH26086	Soybean	plastid	35.63	35.43
KRH22105	Soybean	plastid	36.21	34.62
KRH55312	Soybean	nucleus, plastid	33.33	34.32
Os04t0430800-01	Rice	plastid	34.48	34.29
KRH27229	Soybean	plastid	35.63	34.07
KRH53365	Soybean	plastid	35.06	33.7
HORVU2Hr1G075240.6	Barley	plastid	35.06	33.15
EES12176	Sorghum	plastid	35.63	32.46
Zm00001d003667_P002	Maize	plastid	35.06	32.45
KRH64566	Soybean	plastid	32.76	31.49
KRH15927	Soybean	plastid	21.84	29.92
TraesCS2A01G303200.1	Wheat	plastid	35.06	28.5
TraesCS2D01G301800.1	Wheat	plastid	35.63	25.41
KRG91663	Soybean	plastid	25.29	25.14
KRH35133	Soybean	plastid	24.71	24.57
KRH36129	Soybean	plastid	21.84	21.59
KRG90625	Soybean	plastid	22.41	21.55

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	EMBL:ACUP02004680	EnsemblPlantsGene:GLYMA_07G213700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671
GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869
UniProt:I1KM08	InterPro:IPR013766	ProteinID:KRH50299.1	EnsemblPlants:KRH50300	ProteinID:KRH50300	ProteinID:KRH50300.1
PFAM:PF00085	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF233	SUPFAM:SSF52833
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI00023C5FA7	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:38568158..38571427

Molecular Weight (calculated)

19518.7 Da

IEP (calculated)

9.240

GRAVY (calculated)

-0.130

Length

174 amino acids

Sequence
(BLAST)

001: MASFSLTSSS PTLHKATIID PSSSSSSSSS SHAFPHRPPF VLRMPHQPRR LQTPLVLPKI QSLRHKTRAT PVTKDLWDNS ILKSETPVLV IFYANWCGPC
101: RMVHRIIDEI ATEYAGKLKC FIVNTDTDMQ IAEDYEIKAV PVVLMFKNGE KCDSVIGTMP KEFYVAAIER VLKS

Best Arabidopsis Sequence Match ( AT2G15570.1 )
(BLAST)

001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS

Arabidopsis Description

ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.