Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P02940_001 | Banana | extracellular | 78.08 | 49.57 |
| Os04t0430800-01 | Rice | plastid | 64.38 | 26.86 |
| EES12176 | Sorghum | plastid | 65.75 | 25.13 |
| HORVU2Hr1G075240.6 | Barley | plastid | 63.01 | 25.0 |
| Zm00001d003667_P002 | Maize | plastid | 63.01 | 24.47 |
| PGSC0003DMT400066596 | Potato | plastid | 60.27 | 24.44 |
| VIT_03s0063g00280.t01 | Wine grape | plastid | 57.53 | 24.42 |
| Solyc01g108020.2.1 | Tomato | plastid | 58.9 | 23.89 |
| CDX68513 | Canola | plastid | 53.42 | 22.81 |
| CDY36637 | Canola | plastid | 53.42 | 22.81 |
| AT2G15570.2 | Thale cress | plastid | 53.42 | 22.41 |
| Bra015223.1-P | Field mustard | plastid | 52.05 | 22.22 |
| KRH70646 | Soybean | plastid | 50.68 | 21.89 |
| KRH50300 | Soybean | plastid | 52.05 | 21.84 |
| TraesCS2A01G303200.1 | Wheat | plastid | 63.01 | 21.5 |
| TraesCS2D01G301800.1 | Wheat | plastid | 64.38 | 19.26 |
| GSMUA_Achr11P... | Banana | plastid | 43.84 | 17.49 |
| GSMUA_Achr1P00150_001 | Banana | plastid | 38.36 | 14.89 |
| GSMUA_Achr5P20730_001 | Banana | plastid | 38.36 | 14.74 |
| GSMUA_Achr1P13230_001 | Banana | extracellular | 26.03 | 14.07 |
| GSMUA_Achr11P... | Banana | plastid | 34.25 | 13.74 |
| GSMUA_Achr6P25720_001 | Banana | plastid | 27.4 | 11.76 |
| GSMUA_Achr4P29990_001 | Banana | plastid | 36.99 | 11.39 |
| GSMUA_Achr5P12100_001 | Banana | plastid | 38.36 | 11.38 |
| GSMUA_Achr2P03790_001 | Banana | plastid | 26.03 | 10.67 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr11G12580_001 | EnsemblPlants:GSMUA_Achr11P12580_001 | EnsemblPlants:GSMUA_Achr11T12580_001 | InterPro:IPR013766 |
| UniProt:M0RRN8 | PFAM:PF00085 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF233 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000294841E | : | : | : |
Description
Thioredoxin M3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G12580_001]
Coordinates
chr11:-:11576404..11576625
Molecular Weight (calculated)
8342.1 Da
IEP (calculated)
4.738
GRAVY (calculated)
-0.226
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MVDRLLDEIA RDYAGRIKIY KLDADDYPQI ADFEGIDRVP TVLLFKNGEK LKSLTGTMPK SLYVEAIEQL LSH
001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS
Arabidopsis Description
ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.