CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015223.1-P	Field mustard	plastid	97.66	97.66
CDY36637	Canola	plastid	97.66	97.66
AT2G15570.2	Thale cress	plastid	84.8	83.33
VIT_03s0063g00280.t01	Wine grape	plastid	54.39	54.07
GSMUA_Achr11P...	Banana	cytosol	22.81	53.42
KRH50300	Soybean	plastid	51.46	50.57
GSMUA_Achr3P02940_001	Banana	extracellular	33.92	50.43
PGSC0003DMT400066596	Potato	plastid	51.46	48.89
KRH70646	Soybean	plastid	47.95	48.52
Solyc01g108020.2.1	Tomato	plastid	50.88	48.33
Os04t0430800-01	Rice	plastid	38.01	37.14
HORVU2Hr1G075240.6	Barley	plastid	36.84	34.24
Zm00001d003667_P002	Maize	plastid	37.43	34.04
EES12176	Sorghum	plastid	38.01	34.03
TraesCS2A01G303200.1	Wheat	plastid	36.84	29.44
CDY48214	Canola	plastid	29.82	28.33
CDY61995	Canola	plastid	29.82	28.33
CDX97662	Canola	plastid	31.58	28.12
CDX98554	Canola	plastid	31.58	28.12
CDY48565	Canola	plastid	29.82	27.42
CDY14949	Canola	cytosol	18.13	26.96
CDY21971	Canola	plastid	28.66	26.78
TraesCS2D01G301800.1	Wheat	plastid	38.01	26.64
CDY37416	Canola	plastid	28.07	26.52
CDY30839	Canola	endoplasmic reticulum, extracellular, plasma membrane	23.39	25.32
CDX88314	Canola	plastid	25.15	25.0
CDX87569	Canola	plastid	25.15	25.0
CDY65035	Canola	cytosol	16.96	21.97
CDX82437	Canola	endoplasmic reticulum	15.79	21.43
CDY22789	Canola	plastid	22.81	21.43
CDY24127	Canola	cytosol	15.79	21.26
CDY42508	Canola	plastid	22.22	21.11
CDX75826	Canola	endoplasmic reticulum	15.2	20.47
CDY62030	Canola	endoplasmic reticulum, extracellular, vacuole	13.45	16.79
CDY32507	Canola	plastid	26.9	13.73

Protein Annotations

MapMan:10.5.5	Gene3D:3.40.30.10	GO:A0A078C085	EnsemblPlants:CDX68513	ProteinID:CDX68513	ProteinID:CDX68513.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00126045001	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF233	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0004EEBD80	SEG:seg	:	:	:

Description

BnaC01g25910D

Coordinates

chrLK031788:+:3113830..3115374

Molecular Weight (calculated)

18767.5 Da

IEP (calculated)

7.824

GRAVY (calculated)

-0.002

Length

171 amino acids

Sequence
(BLAST)

001: MAVSSSSMCL NAGRLPPARS ISSPSRLFPV TSFSPRSLLI SDRRSLVSSS GSGLRFSALC LRDSKAAEVT QSSWENSVLK SETPVLVEFY TSWCGPCRMV
101: HRIINEIAGD YAGKLNCYVL DADSDSLVAE EYEIKAVPVV LLFKNGEKRE SIMGTMPKEF YISAIERVLN S

Best Arabidopsis Sequence Match ( AT2G15570.1 )
(BLAST)

001: MAISSSSSSI CFNPTRFHTA RHISSPSRLF PVTSFSPRSL RFSDRRSLLS SSASRLRLSP LCVRDSRAAE VTQRSWEDSV LKSETPVLVE FYTSWCGPCR
101: MVHRIIDEIA GDYAGKLNCY LLNADNDLPV AEEYEIKAVP VVLLFKNGEK RESIMGTMPK EFYISAIERV LNS

Arabidopsis Description

ATHM3Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.