Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G010470.2 | Barley | cytosol | 34.81 | 63.51 |
| HORVU2Hr1G087710.1 | Barley | cytosol | 37.04 | 60.98 |
| Os01t0963400-01 | Rice | cytosol | 54.07 | 59.84 |
| CDY14949 | Canola | cytosol | 48.15 | 56.52 |
| GSMUA_Achr6P25720_001 | Banana | plastid | 65.93 | 52.35 |
| EES02107 | Sorghum | plastid | 59.26 | 46.78 |
| Zm00001d042017_P002 | Maize | plastid | 57.78 | 46.71 |
| TraesCS3B01G577800.1 | Wheat | plastid | 53.33 | 43.9 |
| TraesCS3D01G516800.1 | Wheat | plastid | 53.33 | 43.64 |
| AT1G76760.1 | Thale cress | plastid | 55.56 | 43.6 |
| TraesCS3A01G509000.1 | Wheat | plastid | 52.59 | 43.03 |
| CDX88314 | Canola | plastid | 54.81 | 43.02 |
| AT1G43560.1 | Thale cress | plastid | 51.85 | 41.92 |
| VIT_18s0072g00400.t01 | Wine grape | plastid | 54.07 | 41.71 |
| KRG91663 | Soybean | plastid | 54.07 | 41.71 |
| Bra015721.1-P | Field mustard | plastid | 52.59 | 41.28 |
| CDX87569 | Canola | plastid | 52.59 | 41.28 |
| PGSC0003DMT400061915 | Potato | cytosol, plastid | 51.85 | 41.18 |
| KRH35133 | Soybean | plastid | 53.33 | 41.14 |
| Solyc04g071560.2.1 | Tomato | plastid | 51.11 | 39.66 |
| HORVU5Hr1G116290.1 | Barley | plastid | 40.74 | 39.57 |
| HORVU3Hr1G111930.2 | Barley | plastid | 54.07 | 35.27 |
| GSMUA_Achr11P... | Banana | cytosol | 14.07 | 26.03 |
| GSMUA_Achr3P02940_001 | Banana | extracellular | 21.48 | 25.22 |
| GSMUA_Achr2P03790_001 | Banana | plastid | 26.67 | 20.22 |
| GSMUA_Achr5P20730_001 | Banana | plastid | 24.44 | 17.37 |
| GSMUA_Achr11P... | Banana | plastid | 22.96 | 16.94 |
| GSMUA_Achr1P00150_001 | Banana | plastid | 22.22 | 15.96 |
| GSMUA_Achr11P... | Banana | plastid | 20.0 | 14.84 |
| GSMUA_Achr4P29990_001 | Banana | plastid | 25.19 | 14.35 |
| GSMUA_Achr5P12100_001 | Banana | plastid | 22.22 | 12.2 |
Protein Annotations
| MapMan:10.5.8 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr1G13230_001 | EnsemblPlants:GSMUA_Achr1P13230_001 | EnsemblPlants:GSMUA_Achr1T13230_001 | InterPro:IPR013766 |
| UniProt:M0RZI1 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF280 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI00029693F9 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G13230_001]
Coordinates
chr1:+:10102412..10103823
Molecular Weight (calculated)
15324.0 Da
IEP (calculated)
8.265
GRAVY (calculated)
0.094
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLYSLGLVL PNTLSYSADF GLKVVLLCAF KQKSKPTLPL EKCDKPLLVG FYATWCGPCQ FMVSVLEEVS EKLKDRIQVI KIDTEKYTNI ANCYQIEALP
101: TFIIYRDGKP CVRFEGAMPA HQLIQRIEAD LKVKQ
101: TFIIYRDGKP CVRFEGAMPA HQLIQRIEAD LKVKQ
001: MASISLSSST VPSLNSKESS GVSAFASRSI SAVKFQFPVR RVRTGDLKFP SLSSTTRCTP RRIEAKKQTF DSFEDLLVNS DKPVLVDYYA TWCGPCQFMV
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP
Arabidopsis Description
ATY1TY1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE50]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.