Factsheet for GSMUA_Achr10P22170_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
peroxisome 2
plastid 1
nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48905	Soybean	cytosol	42.15	65.38
PGSC0003DMT400013068	Potato	extracellular	80.99	60.49
Solyc07g020860.2.1	Tomato	plastid	80.17	59.88
EES03426	Sorghum	cytosol	80.17	59.88
Zm00001d011581_P001	Maize	plastid	79.34	59.26
VIT_11s0016g03630.t01	Wine grape	cytosol	79.34	59.26
TraesCS3D01G270100.1	Wheat	cytosol	79.34	59.26
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	79.34	59.26
TraesCS3B01G304100.1	Wheat	cytosol	78.51	58.64
TraesCS3A01G270300.1	Wheat	cytosol	78.51	58.64
AT1G65980.1	Thale cress	cytosol	76.03	56.79
Bra039747.1-P	Field mustard	peroxisome	74.38	55.56
AT1G65970.1	Thale cress	cytosol	73.55	54.94
KRH48355	Soybean	endoplasmic reticulum, nucleus	73.55	54.94
KRH39322	Soybean	endoplasmic reticulum, nucleus	73.55	54.94
CDY39257	Canola	cytosol	73.55	54.94
CDY16429	Canola	cytosol	73.55	54.94
CDY07475	Canola	cytosol	73.55	54.94
Bra004138.1-P	Field mustard	cytosol	73.55	54.94
AT1G60740.1	Thale cress	cytosol	72.73	54.32
CDY66099	Canola	cytosol	64.46	48.15
CDX75114	Canola	cytosol	64.46	48.15
Bra038378.1-P	Field mustard	cytosol	64.46	48.15
HORVU3Hr1G062040.1	Barley	mitochondrion	77.69	45.19
CDY60867	Canola	plastid	75.21	44.17
GSMUA_Achr10P...	Banana	plastid	59.5	31.3
GSMUA_Achr5P15910_001	Banana	plastid	55.37	27.92
GSMUA_Achr8P09520_001	Banana	mitochondrion	33.06	20.3

Protein Annotations

EnsemblPlants:GSMUA_Achr10P22170_001	EnsemblPlants:GSMUA_Achr10T22170_001	EnsemblPlantsGene:GSMUA_Achr10G22170_001	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:PRX5-like	InterPro:Redoxin
InterPro:Thioredoxin-like_sf	KEGG:00480+1.11.1.15	PANTHER:PTHR10430	PANTHER:PTHR10430:SF8	PFAM:PF08534	SUPFAM:SSF52833
UniParc:UPI000296175D	UniProt:M0RKE2	MapMan:10.4.3.2	:	:	:

Description

Peroxiredoxin-2C [Source:GMGC_GENE;Acc:GSMUA_Achr10G22170_001]

Coordinates

chr10:-:27436455..27438603

Molecular Weight (calculated)

13318.1 Da

IEP (calculated)

4.911

GRAVY (calculated)

0.116

Length

121 amino acids

Sequence
(BLAST)

001: MFTILFFFSC SMKHVPGFIE NAEELKSKGV DEILLISVND PFVMKAWAKT YPENKNVKFL ADGSGTYTHA LGLELDLSEK GLGTRSRRFA LLTDDLVVKV
101: ANIEEGGAFT ISGAEEILKA L

Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)

001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL

Arabidopsis Description

PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.