CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039747.1-P	Field mustard	peroxisome	99.38	99.38
AT1G65980.1	Thale cress	cytosol	96.3	96.3
CDY07475	Canola	cytosol	95.68	95.68
CDY39257	Canola	cytosol	95.68	95.68
AT1G65970.1	Thale cress	cytosol	93.83	93.83
AT1G60740.1	Thale cress	cytosol	92.59	92.59
CDX75114	Canola	cytosol	82.72	82.72
CDY66099	Canola	cytosol	82.72	82.72
PGSC0003DMT400013068	Potato	extracellular	82.1	82.1
Solyc07g020860.2.1	Tomato	plastid	80.86	80.86
VIT_11s0016g03630.t01	Wine grape	cytosol	80.25	80.25
Zm00001d011581_P001	Maize	plastid	79.63	79.63
EES03426	Sorghum	cytosol	79.63	79.63
TraesCS3B01G304100.1	Wheat	cytosol	77.78	77.78
CDY60867	Canola	plastid	98.15	77.18
KRH48355	Soybean	endoplasmic reticulum, nucleus	77.16	77.16
TraesCS3A01G270300.1	Wheat	cytosol	77.16	77.16
TraesCS3D01G270100.1	Wheat	cytosol	76.54	76.54
KRH39322	Soybean	endoplasmic reticulum, nucleus	75.93	75.93
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	75.93	75.93
GSMUA_Achr10P...	Banana	extracellular	54.94	73.55
KRH48905	Soybean	cytosol	30.86	64.1
HORVU3Hr1G062040.1	Barley	mitochondrion	76.54	59.62
CDY68640	Canola	plastid	57.41	56.71
CDX78138	Canola	plastid	59.88	42.17
CDX76246	Canola	plastid	59.26	41.92
CDX73586	Canola	plastid	59.26	41.74
CDY27714	Canola	mitochondrion	30.86	24.88
CDY05226	Canola	mitochondrion	30.25	24.38

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:A0A078FU03	UniProt:A0A078FU03	EnsemblPlants:CDY16429
ProteinID:CDY16429	ProteinID:CDY16429.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090984001	InterPro:IPR013766	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352
PANTHER:PTHR10430	PANTHER:PTHR10430:SF8	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0004EE87D0	SEG:seg	:	:	:	:

Description

BnaA02g12330DBnaA02g12330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FU03]

Coordinates

chrLK032063:-:588212..589402

Molecular Weight (calculated)

17433.0 Da

IEP (calculated)

4.988

GRAVY (calculated)

0.068

Length

162 amino acids

Sequence
(BLAST)

001: MAPIAVGDVV PDGSISFFDE NDQLQTVSVH SLAAGKKVIL FGVPGAFTPT CSMQHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTK LLGLELDLKD KGLGVRSRRF ALLIDNLKVT VANVESGGEF TVSSADDILK AL

Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)

001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL

Arabidopsis Description

PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.