CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004138.1-P	Field mustard	cytosol	100.0	100.0
CDY07475	Canola	cytosol	100.0	100.0
AT1G65980.1	Thale cress	cytosol	96.3	96.3
CDY16429	Canola	cytosol	95.68	95.68
AT1G65970.1	Thale cress	cytosol	92.59	92.59
AT1G60740.1	Thale cress	cytosol	91.36	91.36
CDX75114	Canola	cytosol	80.25	80.25
VIT_11s0016g03630.t01	Wine grape	cytosol	80.25	80.25
PGSC0003DMT400013068	Potato	extracellular	80.25	80.25
CDY66099	Canola	cytosol	80.25	80.25
Solyc07g020860.2.1	Tomato	plastid	79.01	79.01
Zm00001d011581_P001	Maize	plastid	77.78	77.78
EES03426	Sorghum	cytosol	77.78	77.78
TraesCS3B01G304100.1	Wheat	cytosol	75.31	75.31
CDY60867	Canola	plastid	95.06	74.76
KRH48355	Soybean	endoplasmic reticulum, nucleus	74.69	74.69
TraesCS3A01G270300.1	Wheat	cytosol	74.69	74.69
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	74.07	74.07
TraesCS3D01G270100.1	Wheat	cytosol	74.07	74.07
GSMUA_Achr10P...	Banana	extracellular	54.94	73.55
KRH39322	Soybean	endoplasmic reticulum, nucleus	73.46	73.46
KRH48905	Soybean	cytosol	30.86	64.1
HORVU3Hr1G062040.1	Barley	mitochondrion	74.07	57.69
CDY68640	Canola	plastid	55.56	54.88
CDX78138	Canola	plastid	58.02	40.87
CDX76246	Canola	plastid	57.41	40.61
CDX73586	Canola	plastid	57.41	40.43
CDY27714	Canola	mitochondrion	29.63	23.88
CDY05226	Canola	mitochondrion	29.01	23.38

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:A0A078HN10	UniProt:A0A078HN10	ProteinID:CDY07475.1
EnsemblPlants:CDY39257	ProteinID:CDY39257	ProteinID:CDY39257.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00067483001	InterPro:IPR013766	PFAM:PF08534	InterPro:PRX5-like
PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF8	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00019AA95D	SEG:seg	:	:	:

Description

BnaC06g27340DBnaA07g25540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN10]

Coordinates

chrLK032444:+:48592..49784

Molecular Weight (calculated)

17432.9 Da

IEP (calculated)

4.810

GRAVY (calculated)

0.052

Length

162 amino acids

Sequence
(BLAST)

001: MAPIAVGDVV PEGTISFFDE NDQLQSASVH TLAAGKKVIL FGVPGAFTPT CSMQHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTQ LLGLELDLKD KGLGVRSRRF ALLLDNLKVT VANVESGGEF TVSSADDILK AL

Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)

001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL

Arabidopsis Description

PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.