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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • cytosol 3
  • peroxisome 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
plastid: 27126603
plasma membrane: 27800704
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27126603 doi
Y Wang, K Ji, S Shen, H Chen
Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03426 Sorghum cytosol 88.89 88.89
Zm00001d011581_P001 Maize plastid 87.65 87.65
TraesCS3D01G270100.1 Wheat cytosol 85.8 85.8
TraesCS3B01G304100.1 Wheat cytosol 85.8 85.8
TraesCS3A01G270300.1 Wheat cytosol 85.8 85.8
GSMUA_Achr10P... Banana extracellular 59.26 79.34
CDY16429 Canola cytosol 75.93 75.93
VIT_11s0016g03630.t01 Wine grape cytosol 75.31 75.31
Bra039747.1-P Field mustard peroxisome 75.31 75.31
AT1G65970.1 Thale cress cytosol 74.07 74.07
CDY39257 Canola cytosol 74.07 74.07
CDY07475 Canola cytosol 74.07 74.07
Bra004138.1-P Field mustard cytosol 74.07 74.07
AT1G60740.1 Thale cress cytosol 73.46 73.46
AT1G65980.1 Thale cress cytosol 73.46 73.46
PGSC0003DMT400013068 Potato extracellular 73.46 73.46
Solyc07g020860.2.1 Tomato plastid 72.22 72.22
KRH48355 Soybean endoplasmic reticulum, nucleus 71.6 71.6
CDY66099 Canola cytosol 70.37 70.37
Bra038378.1-P Field mustard cytosol 70.37 70.37
CDX75114 Canola cytosol 70.37 70.37
KRH39322 Soybean endoplasmic reticulum, nucleus 70.37 70.37
HORVU3Hr1G062040.1 Barley mitochondrion 87.04 67.79
KRH48905 Soybean cytosol 31.48 65.38
CDY60867 Canola plastid 75.31 59.22
Os02t0192700-02 Rice plastid 59.88 43.11
Os06t0625500-01 Rice plastid 59.26 41.38
Os01t0266600-01 Rice mitochondrion 35.19 28.79
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.4.3.2Gene3D:3.40.30.10EntrezGene:4325511EMBL:AF203879EMBL:AK058509
ProteinID:BAB93323.1ProteinID:BAC01192.1ProteinID:BAF05759.1ProteinID:BAS73651.1ProteinID:EAZ13066.1GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016209GO:GO:0016491GO:GO:0019725
GO:GO:0045454GO:GO:0051920GO:GO:0055114GO:GO:0098869InterPro:IPR013766EnsemblPlantsGene:Os01g0675100
EnsemblPlants:Os01t0675100-01PFAM:PF08534InterPro:PRX5-likePFscan:PS51352PANTHER:PTHR10430PANTHER:PTHR10430:SF8
UniProt:Q9FR35InterPro:RedoxinSUPFAM:SSF52833InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00000ABE5D
RefSeq:XP_015622003.1:::::
Description
PRXIICSimilar to peroxiredoxin. (Os01t0675100-01)
Coordinates
chr1:-:27745830..27747887
Molecular Weight (calculated)
17291.9 Da
IEP (calculated)
5.683
GRAVY (calculated)
0.027
Length
162 amino acids
Sequence
(BLAST)
001: MAPVAVGDTL PDGQLGWFDG EDKLQQVSVH GLAAGKKVVL FGVPGAFTPT CSNQHVPGFI NQAEQLKAKG VDDILLVSVN DPFVMKAWAK SYPENKHVKF
101: LADGLGTYTK ALGLELDLSE KGLGIRSRRF ALLADNLKVT VANIEEGGQF TISGAEEILK AL
Best Arabidopsis Sequence Match ( AT1G65970.1 )
(BLAST)
001: MAPITVGDVV PDGTISFFDE NDQLQTVSVH SIAAGKKVIL FGVPGAFTPT CSMSHVPGFI GKAEELKSKG IDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGIRSRRF ALLLDNLKVT VANVESGGEF TVSSAEDILK AL
Arabidopsis Description
PRXIICTPX2 [Source:UniProtKB/TrEMBL;Acc:A0A178WKG0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.