Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G65970.1 | Thale cress | cytosol | 98.77 | 98.77 |
| AT1G65980.1 | Thale cress | cytosol | 93.21 | 93.21 |
| Bra039747.1-P | Field mustard | peroxisome | 92.59 | 92.59 |
| CDY16429 | Canola | cytosol | 92.59 | 92.59 |
| Bra004138.1-P | Field mustard | cytosol | 91.36 | 91.36 |
| CDY07475 | Canola | cytosol | 91.36 | 91.36 |
| CDY39257 | Canola | cytosol | 91.36 | 91.36 |
| Bra038378.1-P | Field mustard | cytosol | 80.25 | 80.25 |
| CDX75114 | Canola | cytosol | 80.25 | 80.25 |
| CDY66099 | Canola | cytosol | 80.25 | 80.25 |
| VIT_11s0016g03630.t01 | Wine grape | cytosol | 79.01 | 79.01 |
| PGSC0003DMT400013068 | Potato | extracellular | 78.4 | 78.4 |
| Solyc07g020860.2.1 | Tomato | plastid | 77.16 | 77.16 |
| Zm00001d011581_P001 | Maize | plastid | 75.93 | 75.93 |
| EES03426 | Sorghum | cytosol | 75.93 | 75.93 |
| TraesCS3B01G304100.1 | Wheat | cytosol | 75.31 | 75.31 |
| TraesCS3A01G270300.1 | Wheat | cytosol | 74.69 | 74.69 |
| TraesCS3D01G270100.1 | Wheat | cytosol | 74.07 | 74.07 |
| KRH48355 | Soybean | endoplasmic reticulum, nucleus | 73.46 | 73.46 |
| Os01t0675100-01 | Rice | extracellular, plasma membrane, plastid | 73.46 | 73.46 |
| GSMUA_Achr10P... | Banana | extracellular | 54.32 | 72.73 |
| KRH39322 | Soybean | endoplasmic reticulum, nucleus | 72.22 | 72.22 |
| CDY60867 | Canola | plastid | 91.36 | 71.84 |
| KRH48905 | Soybean | cytosol | 31.48 | 65.38 |
| HORVU3Hr1G062040.1 | Barley | mitochondrion | 74.07 | 57.69 |
| AT3G52960.1 | Thale cress | plastid | 61.11 | 42.31 |
| AT3G06050.1 | Thale cress | mitochondrion | 32.1 | 25.87 |
Protein Annotations
| KEGG:00480+1.11.1.15 | MapMan:10.4.3.2 | Gene3D:3.40.30.10 | EntrezGene:842368 | ProteinID:AAB71961.1 | ProteinID:AEE33727.1 |
| EMBL:AK176203 | ArrayExpress:AT1G60740 | EnsemblPlantsGene:AT1G60740 | RefSeq:AT1G60740 | TAIR:AT1G60740 | RefSeq:AT1G60740-TAIR-G |
| EnsemblPlants:AT1G60740.1 | TAIR:AT1G60740.1 | EMBL:AY085779 | UniProt:B4G289 | EMBL:BT043477 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016209 |
| GO:GO:0016491 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0051920 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR013766 | RefSeq:NP_564763.1 | UniProt:O22711 | PFAM:PF08534 | PO:PO:0000005 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0009025 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PRX5-like | PFscan:PS51352 |
| PANTHER:PTHR10430 | PANTHER:PTHR10430:SF8 | InterPro:Redoxin | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI00001631A7 | SEG:seg | : | : | : | : |
Description
PRXIIDAt1g60740 [Source:UniProtKB/TrEMBL;Acc:B4G289]
Coordinates
chr1:+:22360977..22362003
Molecular Weight (calculated)
17473.0 Da
IEP (calculated)
5.230
GRAVY (calculated)
0.069
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPITVGDVV PDGTISFFDE NDQLQTVSVH SIAAGKKVIL FGVPGAFTPT CSMSHVPGFI GKAEELKSKG IDEIICFSVN DPFVMKAWGK TYQENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGIRSRRF ALLLDNLKVT VANVENGGEF TVSSAEDILK AL
101: VADGSGEYTH LLGLELDLKD KGLGIRSRRF ALLLDNLKVT VANVENGGEF TVSSAEDILK AL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.