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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • cytosol 3
  • peroxisome 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
 nucleus: 21132161
endoplasmic reticulum: 23041469
nucleus: 24385303
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 24385303 doi
S Komatsu, S Hiraga, MZ Nouri
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba, 305-8518, Japan, skomatsu@affrc.go.jp.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH39322 Soybean endoplasmic reticulum, nucleus 98.77 98.77
KRH48905 Soybean cytosol 43.21 89.74
PGSC0003DMT400013068 Potato extracellular 80.25 80.25
Solyc07g020860.2.1 Tomato plastid 79.63 79.63
AT1G65980.1 Thale cress cytosol 77.78 77.78
VIT_11s0016g03630.t01 Wine grape cytosol 77.78 77.78
Bra039747.1-P Field mustard peroxisome 77.78 77.78
TraesCS3B01G304100.1 Wheat cytosol 77.16 77.16
TraesCS3A01G270300.1 Wheat cytosol 77.16 77.16
CDY16429 Canola cytosol 77.16 77.16
TraesCS3D01G270100.1 Wheat cytosol 76.54 76.54
Zm00001d011581_P001 Maize plastid 75.93 75.93
EES03426 Sorghum cytosol 75.93 75.93
AT1G65970.1 Thale cress cytosol 74.69 74.69
Bra004138.1-P Field mustard cytosol 74.69 74.69
CDY07475 Canola cytosol 74.69 74.69
CDY39257 Canola cytosol 74.69 74.69
GSMUA_Achr10P... Banana extracellular 54.94 73.55
AT1G60740.1 Thale cress cytosol 73.46 73.46
Os01t0675100-01 Rice extracellular, plasma membrane, plastid 71.6 71.6
Bra038378.1-P Field mustard cytosol 67.9 67.9
CDX75114 Canola cytosol 67.9 67.9
CDY66099 Canola cytosol 67.9 67.9
CDY60867 Canola plastid 77.78 61.16
HORVU3Hr1G062040.1 Barley mitochondrion 75.93 59.13
KRH67837 Soybean cytosol 43.83 52.99
KRG96122 Soybean nucleus 53.7 40.47
KRH11396 Soybean cytosol 27.16 30.99
KRH11395 Soybean nucleus 32.1 26.4
KRH20883 Soybean mitochondrion 31.48 26.02
KRH20884 Soybean mitochondrion 31.48 25.89
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.4.3.2EntrezGene:100499771Gene3D:3.40.30.10EMBL:ACUP02004225EMBL:BT089483
UniProt:C6SWE0EnsemblPlantsGene:GLYMA_07G084100GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491GO:GO:0019725GO:GO:0045454
GO:GO:0055114InterPro:IPR013766EnsemblPlants:KRH48355ProteinID:KRH48355ProteinID:KRH48355.1PFAM:PF08534
InterPro:PRX5-likePFscan:PS51352PANTHER:PTHR10430PANTHER:PTHR10430:SF8InterPro:RedoxinSUPFAM:SSF52833
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00019AA962:::
Description
hypothetical protein
Coordinates
chr7:+:7753021..7755002
Molecular Weight (calculated)
17367.1 Da
IEP (calculated)
5.285
GRAVY (calculated)
0.132
Length
162 amino acids
Sequence
(BLAST)
001: MAPIAVGDVI PDGILAYLDE ENKPQTVSIH SLAAGKKVII FGVPGAFTPT CSLKHVPGFI ERAEELKGKG VDEIICISVN DPFVMNSWAK TFPENKHVKF
101: LADGAAKYTN ALGLELDLTD KGLGVRSKRF ALLVEDLKVK VANVESGGEF TISSAEEIIK AL
Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)
001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL
Arabidopsis Description
PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.