CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11396	Soybean	cytosol	57.14	78.87
KRH11395	Soybean	nucleus	70.92	70.56
KRH20884	Soybean	mitochondrion	70.92	70.56
KRH67837	Soybean	cytosol	25.0	36.57
KRH39322	Soybean	endoplasmic reticulum, nucleus	26.02	31.48
KRH48355	Soybean	endoplasmic reticulum, nucleus	26.02	31.48
KRH48905	Soybean	cytosol	11.22	28.21
KRG96122	Soybean	nucleus	30.1	27.44

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	EntrezGene:100805985	Gene3D:3.40.30.10	EMBL:ACUP02008324	EnsemblPlantsGene:GLYMA_13G206900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:K7M0W3	EnsemblPlants:KRH20883	ProteinID:KRH20883	ProteinID:KRH20883.1	PFAM:PF08534	InterPro:PRX5-like
PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF16	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI000233C483	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:32065701..32068163

Molecular Weight (calculated)

21477.8 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.008

Length

196 amino acids

Sequence
(BLAST)

001: MKPDLVKRLT KSLPATLGLK SSSSLAKVTT GTEILSIAPN VSLQKARSWD EGVASNFSTT PLIDIFKDKK VVIFGIPGAF TGVCSEEHVP TYMENIDKFK
101: AKGIDTVICV SINDPYVMNE WAEKLQCKDA IEFYGDFDGS FHKSLKLVTN LSNVLLGTRS ERWSAYVVDG VIKDLNVEED PSVVTVSAAQ TILEQI

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.