CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G093020.1	Barley	cytosol, peroxisome	75.37	61.21
CDY68640	Canola	plastid	71.64	58.54
Bra006963.1-P	Field mustard	plastid	73.88	56.9
KRG96122	Soybean	nucleus	90.3	56.28
VIT_08s0007g03970.t01	Wine grape	plastid	80.6	47.16
GSMUA_Achr10P...	Banana	plastid	79.85	46.52
HORVU6Hr1G034620.1	Barley	plastid	76.12	45.13
TraesCS7A01G394300.1	Wheat	plastid	76.12	44.35
TraesCS6D01G158500.1	Wheat	plastid	74.63	44.25
TraesCS6B01G197100.1	Wheat	plastid	74.63	44.25
TraesCS6A01G169100.1	Wheat	plastid	74.63	44.25
TraesCS7B01G296300.1	Wheat	plastid	75.37	44.1
KRH39322	Soybean	endoplasmic reticulum, nucleus	52.99	43.83
KRH48355	Soybean	endoplasmic reticulum, nucleus	52.99	43.83
Zm00001d046682_P001	Maize	plastid	76.12	43.78
EES06437	Sorghum	plastid	75.37	43.72
Os02t0192700-02	Rice	plastid	73.13	43.56
Os06t0625500-01	Rice	plastid	75.37	43.53
TraesCS7D01G389700.1	Wheat	plastid	74.63	43.48
KXG20408	Sorghum	plastid	75.37	43.35
CDX73586	Canola	plastid	73.88	43.04
CDX78138	Canola	plastid	73.88	43.04
Solyc10g083650.1.1	Tomato	plastid	73.13	42.98
PGSC0003DMT400007049	Potato	cytosol, plastid	74.63	42.92
Bra019637.1-P	Field mustard	plastid	73.13	42.79
AT3G52960.1	Thale cress	plastid	74.63	42.73
PGSC0003DMT400072641	Potato	mitochondrion, plastid	72.39	42.73
CDX76246	Canola	plastid	72.39	42.36
GSMUA_Achr5P15910_001	Banana	plastid	73.13	40.83
KRH48905	Soybean	cytosol	17.91	30.77
KRH20883	Soybean	mitochondrion	36.57	25.0
KRH11396	Soybean	cytosol	26.12	24.65
KRH11395	Soybean	nucleus	32.84	22.34
KRH20884	Soybean	mitochondrion	32.84	22.34
TraesCSU01G031500.1	Wheat	mitochondrion, plastid	41.04	21.24

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	UniProt:A0A0R0KL47	EMBL:ACUP02002083	EnsemblPlantsGene:GLYMA_03G190400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	InterPro:IPR013766	EnsemblPlants:KRH67837	ProteinID:KRH67837	ProteinID:KRH67837.1	PFAM:PF08534
InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF29	InterPro:Redoxin	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0006ED5C72	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:40114196..40114851

Molecular Weight (calculated)

14244.0 Da

IEP (calculated)

5.898

GRAVY (calculated)

0.005

Length

134 amino acids

Sequence
(BLAST)

001: LQEATFSYLD SDGEVKTTTL SDLTNGKKAV LFAVPGAFTP TCSQKHVPGF VEKSGELRAK GVDTIACISV NDAFVMKACN GTFTKAIGVE LDLSDKPVGL
101: GVRSRRYALL AEDGVVKLFN LEEGGAFTFR TSST

Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)

001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL

Arabidopsis Description

PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.