Factsheet for GSMUA_Achr5P15910_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G093020.1	Barley	cytosol, peroxisome	55.0	80.0
KRH67837	Soybean	cytosol	40.83	73.13
Bra006963.1-P	Field mustard	plastid	52.92	72.99
CDY68640	Canola	plastid	47.92	70.12
GSMUA_Achr10P...	Banana	plastid	65.83	68.7
KRG96122	Soybean	nucleus	55.83	62.33
TraesCS7B01G296300.1	Wheat	plastid	58.75	61.57
TraesCS7D01G389700.1	Wheat	plastid	57.92	60.43
TraesCS6D01G158500.1	Wheat	plastid	56.67	60.18
TraesCS6B01G197100.1	Wheat	plastid	56.67	60.18
TraesCS6A01G169100.1	Wheat	plastid	56.67	60.18
HORVU6Hr1G034620.1	Barley	plastid	56.67	60.18
TraesCS7A01G394300.1	Wheat	plastid	57.5	60.0
Os02t0192700-02	Rice	plastid	55.83	59.56
KXG20408	Sorghum	plastid	57.5	59.23
Os06t0625500-01	Rice	plastid	56.67	58.62
EES06437	Sorghum	plastid	55.83	58.01
Zm00001d046682_P001	Maize	plastid	56.25	57.94
CDX78138	Canola	plastid	54.58	56.96
CDX73586	Canola	plastid	54.17	56.52
Solyc10g083650.1.1	Tomato	plastid	53.33	56.14
Bra019637.1-P	Field mustard	plastid	53.33	55.9
PGSC0003DMT400072641	Potato	mitochondrion, plastid	52.5	55.51
CDX76246	Canola	plastid	52.92	55.46
GSMUA_Achr10P...	Banana	extracellular	27.92	55.37
AT3G52960.1	Thale cress	plastid	53.33	54.7
VIT_08s0007g03970.t01	Wine grape	plastid	52.08	54.59
PGSC0003DMT400007049	Potato	cytosol, plastid	51.25	52.79
TraesCSU01G031500.1	Wheat	mitochondrion, plastid	33.33	30.89
GSMUA_Achr8P09520_001	Banana	mitochondrion	21.67	26.4

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G15910_001	EnsemblPlants:GSMUA_Achr5P15910_001	EnsemblPlants:GSMUA_Achr5T15910_001	InterPro:IPR013766
UniProt:M0SYX0	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF29
InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002955A55	SEG:seg

Description

Peroxiredoxin-2E, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G15910_001]

Coordinates

chr5:+:12449078..12449985

Molecular Weight (calculated)

25652.2 Da

IEP (calculated)

9.630

GRAVY (calculated)

0.113

Length

240 amino acids

Sequence
(BLAST)

001: MRRTRVIPPL TEMAASLTEA GAKFVAPASR SSAVVRLRPF VAIRVPRILP HATSTLRLRP AAFPRCFASA PAAVASSTTI SVGDKLPDAT LSYFGPDEEI
101: KTVTVSELTK GKRAVLVAVP GAFTPTCTQK HLPGFVEKAG ELRARGVDTI ACVSVNDVFV MRAWKEDLKI GDEVLLLSDG NGDFTRALGV ELDLRDKPAG
201: LGVRSRRYAM LVEDGVVKVL NLEEGGAFTF SGADDMLKAL

Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)

001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL

Arabidopsis Description

PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.