Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G52960.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT3G52960.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G093020.1 | Barley | cytosol, peroxisome | 72.56 | 72.12 |
| KRH67837 | Soybean | cytosol | 58.54 | 71.64 |
| CDX76246 | Canola | plastid | 90.85 | 65.07 |
| CDX78138 | Canola | plastid | 90.24 | 64.35 |
| CDX73586 | Canola | plastid | 89.63 | 63.91 |
| AT3G52960.1 | Thale cress | plastid | 88.41 | 61.97 |
| CDY16429 | Canola | cytosol | 56.71 | 57.41 |
| CDY07475 | Canola | cytosol | 54.88 | 55.56 |
| CDY39257 | Canola | cytosol | 54.88 | 55.56 |
| KRG96122 | Soybean | nucleus | 69.51 | 53.02 |
| GSMUA_Achr10P... | Banana | plastid | 73.78 | 52.61 |
| CDY66099 | Canola | cytosol | 51.83 | 52.47 |
| CDX75114 | Canola | cytosol | 51.83 | 52.47 |
| TraesCS7B01G296300.1 | Wheat | plastid | 72.56 | 51.97 |
| TraesCS7A01G394300.1 | Wheat | plastid | 72.56 | 51.74 |
| KXG20408 | Sorghum | plastid | 73.17 | 51.5 |
| HORVU6Hr1G034620.1 | Barley | plastid | 70.73 | 51.33 |
| TraesCS7D01G389700.1 | Wheat | plastid | 71.95 | 51.3 |
| Zm00001d046682_P001 | Maize | plastid | 72.56 | 51.07 |
| TraesCS6A01G169100.1 | Wheat | plastid | 70.12 | 50.88 |
| TraesCS6B01G197100.1 | Wheat | plastid | 70.12 | 50.88 |
| TraesCS6D01G158500.1 | Wheat | plastid | 70.12 | 50.88 |
| Os06t0625500-01 | Rice | plastid | 71.95 | 50.86 |
| Os02t0192700-02 | Rice | plastid | 69.51 | 50.67 |
| EES06437 | Sorghum | plastid | 70.12 | 49.78 |
| Solyc10g083650.1.1 | Tomato | plastid | 68.29 | 49.12 |
| PGSC0003DMT400072641 | Potato | mitochondrion, plastid | 67.68 | 48.9 |
| PGSC0003DMT400007049 | Potato | cytosol, plastid | 68.9 | 48.5 |
| GSMUA_Achr5P15910_001 | Banana | plastid | 70.12 | 47.92 |
| VIT_08s0007g03970.t01 | Wine grape | plastid | 65.24 | 46.72 |
| CDY60867 | Canola | plastid | 57.32 | 45.63 |
| CDY27714 | Canola | mitochondrion | 30.49 | 24.88 |
| CDY05226 | Canola | mitochondrion | 29.88 | 24.38 |
| TraesCSU01G031500.1 | Wheat | mitochondrion, plastid | 32.93 | 20.85 |
Protein Annotations
| KEGG:00480+1.11.1.15 | MapMan:10.4.3.2 | Gene3D:3.40.30.10 | GO:A0A078JQA5 | UniProt:A0A078JQA5 | EnsemblPlants:CDY68640 |
| ProteinID:CDY68640 | ProteinID:CDY68640.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00076521001 | InterPro:IPR013766 | PFAM:PF08534 | InterPro:PRX5-like | PFscan:PS51352 |
| PANTHER:PTHR10430 | PANTHER:PTHR10430:SF29 | InterPro:Redoxin | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI0004EE333C | : | : | : | : | : |
Description
BnaCnng59880DBnaCnng59880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQA5]
Coordinates
chrLK037704:+:548..1128
Molecular Weight (calculated)
17619.3 Da
IEP (calculated)
5.305
GRAVY (calculated)
0.054
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIFMVDFLA KYKKSSLDPT SNDVKTVTVS SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAAELRSKG VDVIACVSVN DAFVMEAWRK DLGINDEVML
101: LSDGNGEFTG KLGVELDLRD KPVGLGVRSR RYAILAEDGV VKVLNLEEGG AFTNSSAEDM LKAL
101: LSDGNGEFTG KLGVELDLRD KPVGLGVRSR RYAILAEDGV VKVLNLEEGG AFTNSSAEDM LKAL
001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL
Arabidopsis Description
PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.