CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020782.1-P	Field mustard	mitochondrion	99.5	99.5
CDY05226	Canola	mitochondrion	98.01	98.01
AT3G06050.1	Thale cress	mitochondrion	94.53	94.53
TraesCS3A01G183500.1	Wheat	mitochondrion	70.65	73.96
Solyc01g079820.2.1	Tomato	extracellular	69.15	73.16
PGSC0003DMT400023223	Potato	extracellular	69.15	73.16
HORVU3Hr1G037720.1	Barley	mitochondrion	70.15	73.06
TraesCS3D01G187600.2	Wheat	mitochondrion	69.65	72.54
TraesCS3B01G213200.2	Wheat	mitochondrion	68.66	71.5
Zm00001d040341_P001	Maize	mitochondrion	68.16	70.98
KRH11395	Soybean	nucleus	69.15	70.56
KRH20884	Soybean	mitochondrion	69.15	70.56
OQU86665	Sorghum	mitochondrion	67.66	70.47
Os01t0266600-01	Rice	mitochondrion	68.66	69.7
VIT_05s0020g02850.t01	Wine grape	mitochondrion	69.65	69.65
GSMUA_Achr8P09520_001	Banana	mitochondrion	67.66	69.04
CDY16429	Canola	cytosol	24.88	30.86
CDY68640	Canola	plastid	24.88	30.49
CDY66099	Canola	cytosol	24.38	30.25
CDX75114	Canola	cytosol	24.38	30.25
CDY39257	Canola	cytosol	23.88	29.63
CDY07475	Canola	cytosol	23.88	29.63
CDY60867	Canola	plastid	25.87	25.24
CDX76246	Canola	plastid	27.36	24.02
CDX73586	Canola	plastid	27.36	23.91
CDX78138	Canola	plastid	26.87	23.48

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:A0A078GR87	UniProt:A0A078GR87	EnsemblPlants:CDY27714
ProteinID:CDY27714	ProteinID:CDY27714.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00038509001	InterPro:IPR013766	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352
PANTHER:PTHR10430	PANTHER:PTHR10430:SF16	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0004EDF56F	SEG:seg	:	:	:	:

Description

BnaA05g31230DBnaA05g31230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR87]

Coordinates

chrLK032209:+:18284..20173

Molecular Weight (calculated)

21537.7 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.138

Length

201 amino acids

Sequence
(BLAST)

001: MAMSILKLRN SPALRSAASS ARIGVLSRAF SKLSEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: MDKFKAKGID SIICVSVNDP YTINGWAEKI GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.