CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040341_P001	Maize	mitochondrion	94.3	94.3
TraesCS3D01G187600.2	Wheat	mitochondrion	91.71	91.71
TraesCS3A01G183500.1	Wheat	mitochondrion	91.19	91.67
TraesCS3B01G213200.2	Wheat	mitochondrion	90.67	90.67
HORVU3Hr1G037720.1	Barley	mitochondrion	90.67	90.67
Os01t0266600-01	Rice	mitochondrion	82.9	80.81
Solyc01g079820.2.1	Tomato	extracellular	73.06	74.21
PGSC0003DMT400023223	Potato	extracellular	73.06	74.21
GSMUA_Achr8P09520_001	Banana	mitochondrion	74.09	72.59
CDY05226	Canola	mitochondrion	71.5	68.66
KRH20884	Soybean	mitochondrion	69.95	68.53
KRH11395	Soybean	nucleus	69.43	68.02
AT3G06050.1	Thale cress	mitochondrion	70.47	67.66
CDY27714	Canola	mitochondrion	70.47	67.66
VIT_05s0020g02850.t01	Wine grape	mitochondrion	70.47	67.66
Bra020782.1-P	Field mustard	mitochondrion	70.47	67.66
EES03426	Sorghum	cytosol	26.94	32.1
KXG20408	Sorghum	plastid	31.09	25.75
EES06437	Sorghum	plastid	26.42	22.08

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	EntrezGene:8074509	UniProt:A0A1W0VX27	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	EnsemblPlants:OQU86665
ProteinID:OQU86665	ProteinID:OQU86665.1	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430
PANTHER:PTHR10430:SF16	InterPro:Redoxin	EnsemblPlantsGene:SORBI_3003G124300	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0001A84F08	RefSeq:XP_002457620.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:11286815..11289814

Molecular Weight (calculated)

20697.6 Da

IEP (calculated)

8.665

GRAVY (calculated)

-0.002

Length

193 amino acids

Sequence
(BLAST)

001: MAAPLARRAG RSAAAALWGA ARGFASVGSD IVSAAPGVSL QKARSWDEGV ATKFATTPLK DIFYGKKVVI FGLPGAYTGV CSQAHVPSYK KNIDKLKAKG
101: IDSVICVAVN DPYVLNGWAE KLEAKDAIEF YGDFDGSFHK SLDLEIDLSA ALLGRRSHRW SAFVDNGKIK SFNVEEVPSD FKVSSAEVIL DQI

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.