Factsheet for Zm00001d040341_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86665	Sorghum	mitochondrion	94.3	94.3
TraesCS3D01G187600.2	Wheat	mitochondrion	91.19	91.19
TraesCS3A01G183500.1	Wheat	mitochondrion	90.67	91.15
TraesCS3B01G213200.2	Wheat	mitochondrion	90.16	90.16
HORVU3Hr1G037720.1	Barley	mitochondrion	90.16	90.16
Os01t0266600-01	Rice	mitochondrion	82.38	80.3
PGSC0003DMT400023223	Potato	extracellular	73.58	74.74
Solyc01g079820.2.1	Tomato	extracellular	73.58	74.74
GSMUA_Achr8P09520_001	Banana	mitochondrion	73.06	71.57
CDY05226	Canola	mitochondrion	72.02	69.15
KRH20884	Soybean	mitochondrion	70.47	69.04
KRH11395	Soybean	nucleus	69.95	68.53
Bra020782.1-P	Field mustard	mitochondrion	70.98	68.16
CDY27714	Canola	mitochondrion	70.98	68.16
AT3G06050.1	Thale cress	mitochondrion	70.98	68.16
VIT_05s0020g02850.t01	Wine grape	mitochondrion	70.47	67.66
Zm00001d011581_P001	Maize	plastid	27.98	33.33
Zm00001d046682_P001	Maize	plastid	29.02	24.03

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	EntrezGene:100273860	Gene3D:3.40.30.10	UniProt:B4FSM5	EMBL:BT040113
EMBL:EU952672	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114
GO:GO:0098869	InterPro:IPR013766	ProteinID:ONM31195.1	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352
PANTHER:PTHR10430	PANTHER:PTHR10430:SF16	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI00017B77C9	EnsemblPlantsGene:Zm00001d040341	EnsemblPlants:Zm00001d040341_P001	EnsemblPlants:Zm00001d040341_T001	:	:

Description

Peroxiredoxin-2F mitochondrial

Coordinates

chr3:+:38862363..38865341

Molecular Weight (calculated)

20736.6 Da

IEP (calculated)

8.662

GRAVY (calculated)

-0.062

Length

193 amino acids

Sequence
(BLAST)

001: MAATLARRAG RSAATTLWGA ARGFASVGSD IVSAAPGVSL QKARSWDEGV ATKFSTTPLK DIFYGKKVVI FGLPGAYTGV CSQAHVPSYK KNIDKLKAKG
101: IDSVICVAVN DPYVLDGWAK KLDAKDTIEF YGDFDGSFHK SLDLEIDLSA ALLGRRSHRW SAFVDDGKIK SFNVEEAPSD FKVSGAEVIL DQI

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.