Factsheet for TraesCS3A01G183500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G187600.2	Wheat	mitochondrion	98.96	98.45
TraesCS3B01G213200.2	Wheat	mitochondrion	97.92	97.41
HORVU3Hr1G037720.1	Barley	mitochondrion	97.92	97.41
OQU86665	Sorghum	mitochondrion	91.67	91.19
Zm00001d040341_P001	Maize	mitochondrion	91.15	90.67
Os01t0266600-01	Rice	mitochondrion	86.46	83.84
PGSC0003DMT400023223	Potato	extracellular	74.48	75.26
Solyc01g079820.2.1	Tomato	extracellular	74.48	75.26
GSMUA_Achr8P09520_001	Banana	mitochondrion	76.56	74.62
CDY05226	Canola	mitochondrion	75.0	71.64
KRH20884	Soybean	mitochondrion	73.44	71.57
KRH11395	Soybean	nucleus	72.92	71.07
CDY27714	Canola	mitochondrion	73.96	70.65
Bra020782.1-P	Field mustard	mitochondrion	73.96	70.65
AT3G06050.1	Thale cress	mitochondrion	73.44	70.15
VIT_05s0020g02850.t01	Wine grape	mitochondrion	71.35	68.16
TraesCS3A01G270300.1	Wheat	cytosol	28.12	33.33
TraesCS7A01G394300.1	Wheat	plastid	30.73	25.65
TraesCS6A01G169100.1	Wheat	plastid	28.12	23.89

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF16	InterPro:Redoxin
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS3A01G183500	EnsemblPlants:TraesCS3A01G183500.1	TIGR:cd03013
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:212741215..212744604

Molecular Weight (calculated)

20424.3 Da

IEP (calculated)

8.684

GRAVY (calculated)

-0.007

Length

192 amino acids

Sequence
(BLAST)

001: MAALARRAGG SPAAALWAAA RGFASVGSDI VSAAPGVSLQ KARSWDEGVA TKFSTTPLKD IFHGKKVVIF GLPGAYTGVC SQSHVPSYKN NIDKLKAKGI
101: DSVICVAVND PYVLNGWAEK LQAKDAIEFY GDLDGSFHKS LDLEIDLSAA LLGRRSHRWS AFVDDGKIKA FNVEKAPSDF KVSGAEVILD QI

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.