CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27714	Canola	mitochondrion	98.01	98.01
AT3G06050.1	Thale cress	mitochondrion	94.53	94.53
TraesCS3A01G183500.1	Wheat	mitochondrion	71.64	75.0
HORVU3Hr1G037720.1	Barley	mitochondrion	71.14	74.09
Solyc01g079820.2.1	Tomato	extracellular	69.65	73.68
PGSC0003DMT400023223	Potato	extracellular	69.65	73.68
TraesCS3D01G187600.2	Wheat	mitochondrion	70.65	73.58
TraesCS3B01G213200.2	Wheat	mitochondrion	69.65	72.54
Zm00001d040341_P001	Maize	mitochondrion	69.15	72.02
OQU86665	Sorghum	mitochondrion	68.66	71.5
KRH20884	Soybean	mitochondrion	69.65	71.07
KRH11395	Soybean	nucleus	69.65	71.07
Os01t0266600-01	Rice	mitochondrion	69.65	70.71
VIT_05s0020g02850.t01	Wine grape	mitochondrion	70.15	70.15
GSMUA_Achr8P09520_001	Banana	mitochondrion	68.66	70.05
CDY16429	Canola	cytosol	24.38	30.25
CDY68640	Canola	plastid	24.38	29.88
CDY66099	Canola	cytosol	23.88	29.63
CDX75114	Canola	cytosol	23.88	29.63
CDY39257	Canola	cytosol	23.38	29.01
CDY07475	Canola	cytosol	23.38	29.01
CDY60867	Canola	plastid	25.37	24.76
CDX76246	Canola	plastid	26.37	23.14
CDX73586	Canola	plastid	26.37	23.04
CDX78138	Canola	plastid	25.87	22.61

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:A0A078EVE4	EnsemblPlants:CDY05226	ProteinID:CDY05226
ProteinID:CDY05226.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00120038001	InterPro:IPR013766	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430
PANTHER:PTHR10430:SF16	InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00019AA95A

Description

BnaC05g45770D

Coordinates

chrLK031960:-:451782..453338

Molecular Weight (calculated)

21523.7 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.139

Length

201 amino acids

Sequence
(BLAST)

001: MAMSILKLRN SPALRSAASI ARIGVSSRAF SKLSEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: MDKFKAKGID SVICVSVNDP YTLNGWAEKI GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Best Arabidopsis Sequence Match ( AT3G06050.1 )
(BLAST)

001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I

Arabidopsis Description

PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.